Literature DB >> 9097732

Crystal studies of B-DNA: the answers and the questions.

H M Berman1.   

Abstract

The history of DNA crystallography is reviewed and is followed by discussion of the methods used for structure determination. The features of B-DNA molecular and crystal structures are described.

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Substances:

Year:  1997        PMID: 9097732     DOI: 10.1002/(SICI)1097-0282(1997)44:1<23::AID-BIP3>3.0.CO;2-1

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  22 in total

1.  Modeling helix-turn-helix protein-induced DNA bending with knowledge-based distance restraints.

Authors:  W S Tzou; M J Hwang
Journal:  Biophys J       Date:  1999-09       Impact factor: 4.033

2.  The structure of a stable intermediate in the A <--> B DNA helix transition.

Authors:  H L Ng; M L Kopka; R E Dickerson
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

3.  Intermolecular interactions and water structure in a condensed phase B-DNA crystal.

Authors:  G R Clark; C J Squire; L J Baker; R F Martin; J White
Journal:  Nucleic Acids Res       Date:  2000-03-01       Impact factor: 16.971

4.  A theoretical model for the prediction of sequence-dependent nucleosome thermodynamic stability.

Authors:  C Anselmi; G Bocchinfuso; P De Santis; M Savino; A Scipioni
Journal:  Biophys J       Date:  2000-08       Impact factor: 4.033

5.  Exocyclic groups in the minor groove influence the backbone conformation of DNA.

Authors:  B Wellenzohn; W Flader; R H Winger; A Hallbrucker; E Mayer; K R Liedl
Journal:  Nucleic Acids Res       Date:  2001-12-15       Impact factor: 16.971

6.  Significance of ligand tails for interaction with the minor groove of B-DNA.

Authors:  B Wellenzohn; W Flader; R H Winger; A Hallbrucker; E Mayer; K R Liedl
Journal:  Biophys J       Date:  2001-09       Impact factor: 4.033

7.  DNA bending by an adenine--thymine tract and its role in gene regulation.

Authors:  J Hizver; H Rozenberg; F Frolow; D Rabinovich; Z Shakked
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-03       Impact factor: 11.205

8.  Alpha/gamma transitions in the B-DNA backbone.

Authors:  Péter Várnai; Dragana Djuranovic; Richard Lavery; Brigitte Hartmann
Journal:  Nucleic Acids Res       Date:  2002-12-15       Impact factor: 16.971

9.  Relating repair susceptibility of carcinogen-damaged DNA with structural distortion and thermodynamic stability.

Authors:  Min Wu; Shixiang Yan; Dinshaw J Patel; Nicholas E Geacintov; Suse Broyde
Journal:  Nucleic Acids Res       Date:  2002-08-01       Impact factor: 16.971

10.  Right-handed double-helix ultrashort DNA yields chiral nematic phases with both right- and left-handed director twist.

Authors:  Giuliano Zanchetta; Fabio Giavazzi; Michi Nakata; Marco Buscaglia; Roberto Cerbino; Noel A Clark; Tommaso Bellini
Journal:  Proc Natl Acad Sci U S A       Date:  2010-09-27       Impact factor: 11.205

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