Literature DB >> 9097040

A 460-kb DNA sequence of the Escherichia coli K-12 genome corresponding to the 40.1-50.0 min region on the linkage map.

T Itoh1, H Aiba, T Baba, K Hayashi, T Inada, K Isono, H Kasai, S Kimura, M Kitakawa, M Kitagawa, K Makino, T Miki, K Mizobuchi, H Mori, T Mori, K Motomura, S Nakade, Y Nakamura, H Nashimoto, Y Nishio, T Oshima, N Saito, G Sampei, Y Seki, T Horiuchi.   

Abstract

The 465,813 base pair sequence corresponding to the 40.1-50.0 min region on the genetic map of Escherichia coli K-12 (W3110) was determined. Analysis of the sequence revealed that this region contained at least 466 potential open reading frames, of which 187 (40%) were previously reported, 105 (23%) were homologous to other known genes, 103 (22%) were identical or similar to hypothetical genes registered in databases, and the remaining 71 (15%) did not show a significant similarity to any other gene. At the 45.2-46.0 min region, we found a very large cluster of about 30 genes, whose functions are involved in the biosynthesis of polysaccharides as the components of outer membranes. In addition, we identified a new asn-tRNA gene, designated asnW, between the asnT and asnU genes and a new lysogenic phage attachment site as the cis-element.

Entities:  

Mesh:

Substances:

Year:  1996        PMID: 9097040     DOI: 10.1093/dnares/3.6.379

Source DB:  PubMed          Journal:  DNA Res        ISSN: 1340-2838            Impact factor:   4.458


  16 in total

1.  Biochemical-genetic characterization of the chromosomally encoded extended-spectrum class A beta-lactamase from Rahnella aquatilis.

Authors:  S Bellais; L Poirel; N Fortineau; J W Decousser; P Nordmann
Journal:  Antimicrob Agents Chemother       Date:  2001-10       Impact factor: 5.191

2.  Characterization of the distal tail fiber locus and determination of the receptor for phage AR1, which specifically infects Escherichia coli O157:H7.

Authors:  S L Yu; K L Ko; C S Chen; Y C Chang; W J Syu
Journal:  J Bacteriol       Date:  2000-11       Impact factor: 3.490

3.  Cloning, expression, and nucleotide sequence of the Pseudomonas aeruginosa 142 ohb genes coding for oxygenolytic ortho dehalogenation of halobenzoates.

Authors:  T V Tsoi; E G Plotnikova; J R Cole; W F Guerin; M Bagdasarian; J M Tiedje
Journal:  Appl Environ Microbiol       Date:  1999-05       Impact factor: 4.792

4.  The beta-barrel finder (BBF) program, allowing identification of outer membrane beta-barrel proteins encoded within prokaryotic genomes.

Authors:  Yufeng Zhai; Milton H Saier
Journal:  Protein Sci       Date:  2002-09       Impact factor: 6.725

Review 5.  Linkage map of Escherichia coli K-12, edition 10: the traditional map.

Authors:  M K Berlyn
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

Review 6.  Linkage map of Escherichia coli K-12, edition 10: the physical map.

Authors:  K E Rudd
Journal:  Microbiol Mol Biol Rev       Date:  1998-09       Impact factor: 11.056

7.  Periplasmic nitrate reductase (NapABC enzyme) supports anaerobic respiration by Escherichia coli K-12.

Authors:  Valley Stewart; Yiran Lu; Andrew J Darwin
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

8.  Molecular epidemiologic identification of Escherichia coli genes that are potentially involved in movement of the organism from the intestinal tract to the vagina and bladder.

Authors:  Jingping Xie; Betsy Foxman; Lixin Zhang; Carl F Marrs
Journal:  J Clin Microbiol       Date:  2006-07       Impact factor: 5.948

9.  Molecular characterization of a Brucella species large DNA fragment deleted in Brucella abortus strains: evidence for a locus involved in the synthesis of a polysaccharide.

Authors:  N Vizcaíno; A Cloeckaert; M S Zygmunt; L Fernández-Lago
Journal:  Infect Immun       Date:  1999-06       Impact factor: 3.441

10.  Iron is a ligand of SecA-like metal-binding domains in vivo.

Authors:  Tamar Cranford-Smith; Mohammed Jamshad; Mark Jeeves; Rachael A Chandler; Jack Yule; Ashley Robinson; Farhana Alam; Karl A Dunne; Edwin H Aponte Angarita; Mashael Alanazi; Cailean Carter; Ian R Henderson; Janet E Lovett; Peter Winn; Timothy Knowles; Damon Huber
Journal:  J Biol Chem       Date:  2020-04-02       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.