Literature DB >> 9095194

Improved R-factors for diffraction data analysis in macromolecular crystallography.

K Diederichs1, P A Karplus.   

Abstract

The quantity Rsym (also called Rmerge) is almost universally used for describing X-ray diffraction data quality. Here, we prove that Rsym is seriously flawed, because it has an implicit dependence on the redundance of the data. A corrected R-factor, Rmeas, is introduced as the equivalent robust indicator of data consistency. In addition, we introduce Rmrgd an R-factor that reflects the gain in accuracy upon averaging of equivalent reflections, as a useful indicator of the quality of reduced data. These new data quality indicators better reveal the benefits of highly redundant data and should stimulate improvements in data quality through increased merging of data from multiple crystals.

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Year:  1997        PMID: 9095194     DOI: 10.1038/nsb0497-269

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN: 1072-8368


  424 in total

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3.  Crystal structure of MalK, the ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis.

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4.  Structure and mechanism of the RNA triphosphatase component of mammalian mRNA capping enzyme.

Authors:  A Changela; C K Ho; A Martins; S Shuman; A Mondragón
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

5.  A crystallographic map of the transition from B-DNA to A-DNA.

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-05       Impact factor: 11.205

6.  Structure of human Na+/H+ exchanger NHE1 regulatory region in complex with calmodulin and Ca2+.

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8.  Binding partners for the COOH-terminal appendage domains of the GGAs and gamma-adaptin.

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Journal:  Mol Biol Cell       Date:  2003-03-20       Impact factor: 4.138

9.  The crystal structure of the ligand-binding module of human TAG-1 suggests a new mode of homophilic interaction.

Authors:  Mario Mörtl; Peter Sonderegger; Kay Diederichs; Wolfram Welte
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10.  Expression, purification, crystallization and preliminary X-ray crystallographic studies of hepatitis B virus core fusion protein corresponding to octahedral particles.

Authors:  Masaki Kikuchi; Shinichiro Iwabuchi; Tatsuhiko Kikkou; Keiichi Noguchi; Masafumi Odaka; Masafumi Yohda; Masaaki Kawata; Chikara Sato; Osamu Matsumoto
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