Literature DB >> 11080142

Crystal structure of MalK, the ATPase subunit of the trehalose/maltose ABC transporter of the archaeon Thermococcus litoralis.

K Diederichs1, J Diez, G Greller, C Müller, J Breed, C Schnell, C Vonrhein, W Boos, W Welte.   

Abstract

The members of the ABC transporter family transport a wide variety of molecules into or out of cells and cellular compartments. Apart from a translocation pore, each member possesses two similar nucleoside triphosphate-binding subunits or domains in order to couple the energy-providing reaction with transport. In the maltose transporter of several Gram-negative bacteria and the archaeon Thermo coccus litoralis, the nucleoside triphosphate-binding subunit contains a C-terminal regulatory domain. A dimer of the subunit is attached cytoplasmically to the translocation pore. Here we report the crystal structure of this dimer showing two bound pyrophosphate molecules at 1.9 A resolution. The dimer forms by association of the ATPase domains, with the two regulatory domains attached at opposite poles. Significant deviation from 2-fold symmetry is seen at the interface of the dimer and in the regions corresponding to those residues known to be in contact with the translocation pore. The structure and its relationship to function are discussed in the light of known mutations from the homologous Escherichia coli and Salmonella typhimurium proteins.

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Year:  2000        PMID: 11080142      PMCID: PMC305842          DOI: 10.1093/emboj/19.22.5951

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  54 in total

Review 1.  ABC-ATPases, adaptable energy generators fuelling transmembrane movement of a variety of molecules in organisms from bacteria to humans.

Authors:  I B Holland; M A Blight
Journal:  J Mol Biol       Date:  1999-10-22       Impact factor: 5.469

2.  Molecular and biochemical analysis of MalK, the ATP-hydrolyzing subunit of the trehalose/maltose transport system of the hyperthermophilic archaeon Thermococcus litoralis.

Authors:  G Greller; R Horlacher; J DiRuggiero; W Boos
Journal:  J Biol Chem       Date:  1999-07-16       Impact factor: 5.157

3.  Structural biology of Rad50 ATPase: ATP-driven conformational control in DNA double-strand break repair and the ABC-ATPase superfamily.

Authors:  K P Hopfner; A Karcher; D S Shin; L Craig; L M Arthur; J P Carney; J A Tainer
Journal:  Cell       Date:  2000-06-23       Impact factor: 41.582

4.  The CCP4 suite: programs for protein crystallography.

Authors: 
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1994-09-01

5.  MalK forms a dimer independent of its assembly into the MalFGK2 ATP-binding cassette transporter of Escherichia coli.

Authors:  K A Kennedy; B Traxler
Journal:  J Biol Chem       Date:  1999-03-05       Impact factor: 5.157

6.  ATP modulates subunit-subunit interactions in an ATP-binding cassette transporter (MalFGK2) determined by site-directed chemical cross-linking.

Authors:  S Hunke; M Mourez; M Jehanno; E Dassa; E Schneider
Journal:  J Biol Chem       Date:  2000-05-19       Impact factor: 5.157

7.  Functional consequences of mutations in the conserved 'signature sequence' of the ATP-binding-cassette protein MalK.

Authors:  G Schmees; A Stein; S Hunke; H Landmesser; E Schneider
Journal:  Eur J Biochem       Date:  1999-12

8.  Novel missense mutations that affect the transport function of MalK, the ATP-binding-cassette subunit of the Salmonella enterica serovar typhimurium maltose transport system.

Authors:  S Hunke; H Landmesser; E Schneider
Journal:  J Bacteriol       Date:  2000-03       Impact factor: 3.490

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  High cell density cultivation of Escherichia coli at controlled specific growth rate.

Authors:  D Riesenberg; V Schulz; W A Knorre; H D Pohl; D Korz; E A Sanders; A Ross; W D Deckwer
Journal:  J Biotechnol       Date:  1991-08       Impact factor: 3.307

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  78 in total

Review 1.  Mechanism of coupling of transport to hydrolysis in bacterial ATP-binding cassette transporters.

Authors:  Amy L Davidson
Journal:  J Bacteriol       Date:  2002-03       Impact factor: 3.490

2.  Cooperative, ATP-dependent association of the nucleotide binding cassettes during the catalytic cycle of ATP-binding cassette transporters.

Authors:  Jonathan E Moody; Linda Millen; Derk Binns; John F Hunt; Philip J Thomas
Journal:  J Biol Chem       Date:  2002-04-18       Impact factor: 5.157

3.  Operon structure and regulation of the nos gene region of Pseudomonas stutzeri, encoding an ABC-Type ATPase for maturation of nitrous oxide reductase.

Authors:  Ulrike Honisch; Walter G Zumft
Journal:  J Bacteriol       Date:  2003-03       Impact factor: 3.490

4.  Conformational analysis of human ATP-binding cassette transporter ABCB1 in lipid nanodiscs and inhibition by the antibodies MRK16 and UIC2.

Authors:  Tasha K Ritchie; Hyewon Kwon; William M Atkins
Journal:  J Biol Chem       Date:  2011-09-21       Impact factor: 5.157

5.  Solution structure of ribosomal protein S28E from Methanobacterium thermoautotrophicum.

Authors:  Bin Wu; Adelinda Yee; Antonio Pineda-Lucena; Anthony Semesi; Theresa A Ramelot; John R Cort; Jin-Won Jung; Aled Edwards; Weontae Lee; Michael Kennedy; Cheryl H Arrowsmith
Journal:  Protein Sci       Date:  2003-12       Impact factor: 6.725

6.  Solution NMR structure of the 30S ribosomal protein S28E from Pyrococcus horikoshii.

Authors:  James M Aramini; Yuanpeng J Huang; John R Cort; Sharon Goldsmith-Fischman; Rong Xiao; Liang-Yu Shih; Chi K Ho; Jinfeng Liu; Burkhard Rost; Barry Honig; Michael A Kennedy; Thomas B Acton; Gaetano T Montelione
Journal:  Protein Sci       Date:  2003-12       Impact factor: 6.725

7.  The alternating ATPase domains of MutS control DNA mismatch repair.

Authors:  Meindert H Lamers; Herrie H K Winterwerp; Titia K Sixma
Journal:  EMBO J       Date:  2003-02-03       Impact factor: 11.598

8.  Definition of the domain boundaries is critical to the expression of the nucleotide-binding domains of P-glycoprotein.

Authors:  Ian D Kerr; Georgina Berridge; Kenneth J Linton; Christopher F Higgins; Richard Callaghan
Journal:  Eur Biophys J       Date:  2003-06-26       Impact factor: 1.733

9.  Mechanism of ABC transporters: a molecular dynamics simulation of a well characterized nucleotide-binding subunit.

Authors:  Peter M Jones; Anthony M George
Journal:  Proc Natl Acad Sci U S A       Date:  2002-09-17       Impact factor: 11.205

10.  Mutations in the linker domain of NBD2 of SUR inhibit transduction but not nucleotide binding.

Authors:  Michinori Matsuo; Michael Dabrowski; Kazumitsu Ueda; Frances M Ashcroft
Journal:  EMBO J       Date:  2002-08-15       Impact factor: 11.598

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