Literature DB >> 9079355

On-pathway versus off-pathway folding intermediates.

R L Baldwin1.   

Abstract

Rapidly formed molten globule intermediates accumulate at the start of the folding reactions of several small proteins. Opinion is sharply divided as to whether they are on-pathway or off-pathway intermediates. I discuss recent experiments aimed at resolving this issue. Specific points include whether a 'rollover' in the plot of folding rate versus denaturant concentration implies that a folding intermediate is or is not on-pathway; whether the failure to observe folding intermediates for some small proteins implies a different folding mechanism or only that the intermediates are less stable; possible interpretation of 'fast-track' folding of hen lysozyme; and the significance of recent results in the search for unfolding intermediates.

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Year:  1996        PMID: 9079355     DOI: 10.1016/S1359-0278(96)00003-X

Source DB:  PubMed          Journal:  Fold Des        ISSN: 1359-0278


  46 in total

1.  Observation of strange kinetics in protein folding.

Authors:  J Sabelko; J Ervin; M Gruebele
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-25       Impact factor: 11.205

2.  Reversible aggregation plays a crucial role on the folding landscape of p53 core domain.

Authors:  Daniella Ishimaru; Luis M T R Lima; Lenize F Maia; Priscila M Lopez; Ana P Ano Bom; Ana P Valente; Jerson L Silva
Journal:  Biophys J       Date:  2004-08-06       Impact factor: 4.033

3.  Folding intermediate and folding nucleus for I-->N and U-->I-->N transitions in apomyoglobin: contributions by conserved and nonconserved residues.

Authors:  Ekaterina N Samatova; Bogdan S Melnik; Vitaly A Balobanov; Natalya S Katina; Dmitry A Dolgikh; Gennady V Semisotnov; Alexei V Finkelstein; Valentina E Bychkova
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

4.  Three-state protein folding: experimental determination of free-energy profile.

Authors:  Ekaterina N Baryshnikova; Bogdan S Melnik; Alexei V Finkelstein; Gennady V Semisotnov; Valentina E Bychkova
Journal:  Protein Sci       Date:  2005-09-09       Impact factor: 6.725

5.  p25alpha is flexible but natively folded and binds tubulin with oligomeric stoichiometry.

Authors:  Daniel E Otzen; Ditte M S Lundvig; Reinhard Wimmer; Lotte H Nielsen; Jakob R Pedersen; Poul H Jensen
Journal:  Protein Sci       Date:  2005-05-09       Impact factor: 6.725

Review 6.  Single-molecule fluorescence studies of protein folding and conformational dynamics.

Authors:  Xavier Michalet; Shimon Weiss; Marcus Jäger
Journal:  Chem Rev       Date:  2006-05       Impact factor: 60.622

7.  A tightly packed hydrophobic cluster directs the formation of an off-pathway sub-millisecond folding intermediate in the alpha subunit of tryptophan synthase, a TIM barrel protein.

Authors:  Ying Wu; Ramakrishna Vadrevu; Sagar Kathuria; Xiaoyan Yang; C Robert Matthews
Journal:  J Mol Biol       Date:  2006-12-15       Impact factor: 5.469

8.  Partially unfolded forms and non-two-state folding of a beta-sandwich: FHA domain from Arabidopsis receptor kinase-associated protein phosphatase.

Authors:  Xiangyang Liang; Gui-in Lee; Steven R Van Doren
Journal:  J Mol Biol       Date:  2006-09-03       Impact factor: 5.469

9.  Exploring subdomain cooperativity in T4 lysozyme II: uncovering the C-terminal subdomain as a hidden intermediate in the kinetic folding pathway.

Authors:  Jason Cellitti; Rachel Bernstein; Susan Marqusee
Journal:  Protein Sci       Date:  2007-03-30       Impact factor: 6.725

10.  A novel folding intermediate state for apolipoprotein A-I: role of the amino and carboxy termini.

Authors:  Eitan Gross; Dao-Quan Peng; Stanley L Hazen; Jonathan D Smith
Journal:  Biophys J       Date:  2005-12-02       Impact factor: 4.033

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