Literature DB >> 9016767

Construction of cDNA libraries from small amounts of total RNA using the suppression PCR effect.

K Lukyanov1, L Diatchenko, A Chenchik, A Nanisetti, P Siebert, N Usman, M Matz, S Lukyanov.   

Abstract

Here we describe a method for preparing high-quality cDNA libraries from total RNA. By this method, double-stranded (ds) cDNA ligated with a specially designed ds adaptor is amplified by PCR using a modified T-primer and another primer corresponding to the outer part of the adaptor. The suppression PCR effect strongly inhibits the amplification of poly(A) RNA, thereby reducing background. This method leads to amplification of high-quality cDNA, facilitating the construction of representative cDNA libraries from as little as 10-100 ng of total RNA.

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Year:  1997        PMID: 9016767     DOI: 10.1006/bbrc.1996.5948

Source DB:  PubMed          Journal:  Biochem Biophys Res Commun        ISSN: 0006-291X            Impact factor:   3.575


  6 in total

1.  Mirror orientation selection (MOS): a method for eliminating false positive clones from libraries generated by suppression subtractive hybridization.

Authors:  D V Rebrikov; O V Britanova; N G Gurskaya; K A Lukyanov; V S Tarabykin; S A Lukyanov
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

2.  Simple cDNA normalization using kamchatka crab duplex-specific nuclease.

Authors:  Pavel A Zhulidov; Ekaterina A Bogdanova; Alex S Shcheglov; Laura L Vagner; George L Khaspekov; Valery B Kozhemyako; Mikhail V Matz; Ella Meleshkevitch; Leonid L Moroz; Sergey A Lukyanov; Dmitry A Shagin
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

3.  Transcriptomic analysis of cold response in tomato fruits identifies dehydrin as a marker of cold stress.

Authors:  J Weiss; M Egea-Cortines
Journal:  J Appl Genet       Date:  2009       Impact factor: 3.240

4.  Decoding the fine-scale structure of a breast cancer genome and transcriptome.

Authors:  Stanislav Volik; Benjamin J Raphael; Guiqing Huang; Michael R Stratton; Graham Bignel; John Murnane; John H Brebner; Krystyna Bajsarowicz; Pamela L Paris; Quanzhou Tao; David Kowbel; Anna Lapuk; Dmitri A Shagin; Irina A Shagina; Joe W Gray; Jan-Fang Cheng; Pieter J de Jong; Pavel Pevzner; Colin Collins
Journal:  Genome Res       Date:  2006-02-03       Impact factor: 9.043

5.  Amplified RNA degradation in T7-amplification methods results in biased microarray hybridizations.

Authors:  Andrej-Nikolai Spiess; Nadine Mueller; Richard Ivell
Journal:  BMC Genomics       Date:  2003-11-10       Impact factor: 3.969

Review 6.  Quantitative Visions of Reality at the Tick-Host Interface: Biochemistry, Genomics, Proteomics, and Transcriptomics as Measures of Complete Inventories of the Tick Sialoverse.

Authors:  Ben J Mans
Journal:  Front Cell Infect Microbiol       Date:  2020-09-11       Impact factor: 5.293

  6 in total

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