Literature DB >> 9016626

Flavin adenine dinucleotide as a chromophore of the Xenopus (6-4)photolyase.

T Todo1, S T Kim, K Hitomi, E Otoshi, T Inui, H Morioka, H Kobayashi, E Ohtsuka, H Toh, M Ikenaga.   

Abstract

Two types of enzyme utilizing light from the blue and near-UV spectral range (320-520 nm) are known to have related primary structures: DNA photolyase, which repairs UV-induced DNA damage in a light-dependent manner, and the blue light photoreceptor of plants, which mediates light-dependent regulation of seedling development. Cyclobutane pyrimidine dimers (CPDs) and pyrimidine (6-4) pyrimidone photoproducts [(6-4)photoproducts] are the two major photoproducts produced in DNA by UV irradiation. Two types of photolyases have been identified, one specific for CPDs (CPD photolyase) and another specific for (6-4)photoproducts [(6-4)photolyase]. (6-4)Photolyase activity was first found in Drosophila melanogaster and to date this gene has been cloned only from this organism. The deduced amino acid sequence of the cloned gene shows that (6-4)photolyase is a member of the CPD photolyase/blue light photoreceptor family. Both CPD photolyase and blue light photoreceptor are flavoproteins and bound flavin adenine dinucleotides (FADs) are essential for their catalytic activity. Here we report isolation of a Xenopus laevis(6-4)photolyase gene and show that the (6-4)photolyase binds non- covalently to stoichiometric amounts of FAD. This is the first indication of FAD as the chromophore of (6-4)photolyase.

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Year:  1997        PMID: 9016626      PMCID: PMC146514          DOI: 10.1093/nar/25.4.764

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  23 in total

Review 1.  DNA photolyases: physical properties, action mechanism, and roles in dark repair.

Authors:  G B Sancar
Journal:  Mutat Res       Date:  1990 Sep-Nov       Impact factor: 2.433

2.  UV mutagenic photoproducts in Escherichia coli and human cells: a molecular genetics perspective on human skin cancer.

Authors:  D E Brash
Journal:  Photochem Photobiol       Date:  1988-07       Impact factor: 3.421

3.  Preparation and characterization of a set of deoxyoligonucleotide 49-mers containing site-specific cis-syn, trans-syn-I, (6-4), and Dewar photoproducts of thymidylyl(3'-->5')-thymidine.

Authors:  C A Smith; J S Taylor
Journal:  J Biol Chem       Date:  1993-05-25       Impact factor: 5.157

Review 4.  Out of darkness: mutants reveal pathways controlling light-regulated development in plants.

Authors:  J Chory
Journal:  Trends Genet       Date:  1993-05       Impact factor: 11.639

Review 5.  The biology of the (6-4) photoproduct.

Authors:  D L Mitchell; R S Nairn
Journal:  Photochem Photobiol       Date:  1989-06       Impact factor: 3.421

6.  Reconstitution of Escherichia coli photolyase with flavins and flavin analogues.

Authors:  G Payne; M Wills; C Walsh; A Sancar
Journal:  Biochemistry       Date:  1990-06-19       Impact factor: 3.162

7.  A Light-Dependent Pathway for the Elimination of UV-Induced Pyrimidine (6-4) Pyrimidinone Photoproducts in Arabidopsis.

Authors:  J. J. Chen; D. L. Mitchell; A. B. Britt
Journal:  Plant Cell       Date:  1994-09       Impact factor: 11.277

8.  Visible light-inducible photolyase gene from the goldfish Carassius auratus.

Authors:  S Yasuhira; A Yasui
Journal:  J Biol Chem       Date:  1992-12-25       Impact factor: 5.157

9.  Association of flavin adenine dinucleotide with the Arabidopsis blue light receptor CRY1.

Authors:  C Lin; D E Robertson; M Ahmad; A A Raibekas; M S Jorns; P L Dutton; A R Cashmore
Journal:  Science       Date:  1995-08-18       Impact factor: 47.728

10.  A new class of DNA photolyases present in various organisms including aplacental mammals.

Authors:  A Yasui; A P Eker; S Yasuhira; H Yajima; T Kobayashi; M Takao; A Oikawa
Journal:  EMBO J       Date:  1994-12-15       Impact factor: 11.598

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  20 in total

1.  Role of Lys281 in the Dunaliella salina (6-4) photolyase reaction.

Authors:  Feiwei Zhang; Hui Xu; Yu Cao; Tao Wen; Jiafu Lin; Gen Ma; Dairong Qiao; Yi Cao
Journal:  Curr Microbiol       Date:  2010-06-09       Impact factor: 2.188

2.  Light-induced conformational change and product release in DNA repair by (6-4) photolyase.

Authors:  Masato Kondoh; Kenichi Hitomi; Junpei Yamamoto; Takeshi Todo; Shigenori Iwai; Elizabeth D Getzoff; Masahide Terazima
Journal:  J Am Chem Soc       Date:  2011-01-27       Impact factor: 15.419

3.  Evolution of mutation rates: phylogenomic analysis of the photolyase/cryptochrome family.

Authors:  José Ignacio Lucas-Lledó; Michael Lynch
Journal:  Mol Biol Evol       Date:  2009-02-19       Impact factor: 16.240

4.  Photoactivation of the flavin cofactor in Xenopus laevis (6 - 4) photolyase: observation of a transient tyrosyl radical by time-resolved electron paramagnetic resonance.

Authors:  Stefan Weber; Christopher W M Kay; Heike Mögling; Klaus Möbius; Kenichi Hitomi; Takeshi Todo
Journal:  Proc Natl Acad Sci U S A       Date:  2002-01-22       Impact factor: 11.205

5.  Thermodynamic and base-pairing studies of matched and mismatched DNA dodecamer duplexes containing cis-syn, (6-4) and Dewar photoproducts of TT.

Authors:  Y Jing; J F Kao; J S Taylor
Journal:  Nucleic Acids Res       Date:  1998-08-15       Impact factor: 16.971

Review 6.  Photobiomodulation of mineralisation in mesenchymal stem cells.

Authors:  Sherif A Mohamad; Michael R Milward; Mohammed A Hadis; Sarah A Kuehne; Paul R Cooper
Journal:  Photochem Photobiol Sci       Date:  2021-05-04       Impact factor: 3.982

7.  Fourier-transform infrared study of the photoactivation process of Xenopus (6-4) photolyase.

Authors:  Daichi Yamada; Yu Zhang; Tatsuya Iwata; Kenichi Hitomi; Elizabeth D Getzoff; Hideki Kandori
Journal:  Biochemistry       Date:  2012-07-13       Impact factor: 3.162

8.  Bacterial cryptochrome and photolyase: characterization of two photolyase-like genes of Synechocystis sp. PCC6803.

Authors:  K Hitomi; K Okamoto; H Daiyasu; H Miyashita; S Iwai; H Toh; M Ishiura; T Todo
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

Review 9.  Chlamydomonas reinhardtii: a convenient model system for the study of DNA repair in photoautotrophic eukaryotes.

Authors:  Daniel Vlcek; Andrea Sevcovicová; Barbara Sviezená; Eliska Gálová; Eva Miadoková
Journal:  Curr Genet       Date:  2007-11-09       Impact factor: 3.886

10.  A gene for a Class II DNA photolyase from Oryza sativa: cloning of the cDNA by dilution-amplification.

Authors:  T Hirouchi; S Nakajima; T Najrana; M Tanaka; T Matsunaga; J Hidema; M Teranishi; T Fujino; T Kumagai; K Yamamoto
Journal:  Mol Genet Genomics       Date:  2003-05-22       Impact factor: 3.291

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