Literature DB >> 9016623

The RAD5 gene product is involved in the avoidance of non-homologous end-joining of DNA double strand breaks in the yeast Saccharomyces cerevisiae.

F Ahne1, B Jha, F Eckardt-Schupp.   

Abstract

In wild-type yeast, the repair of a 169 bp double-strand gap induced by the restriction enzymes ApaI and NcoI in the URA3gene of the shuttle vector YpJA18 occurs with high fidelity according to the homologous chromosomal sequence. In contrast, only 25% of the cells of rad5-7 and rad5 Delta mutants perform correct gap repair. As has been proven by sequencing of the junction sites, the remaining cells recircularise the gapped plasmids by joining of the non-compatible, non-homologous ends. Thus, regarding the repair of DNA double-strand breaks, the rad5 mutants behave like mammalian cells rather than budding yeast. The majority of the end joined plasmids miss either one or both of the 3'and 5'protruding single-strands of the restriction ends completely and have undergone blunt-end ligation accompanied by fill-in DNA synthesis. These results imply an important role for the Rad5 protein (Rad5p) in the protection of protruding single-strand ends and for the avoidance of non-homologous end joining during repair of double-strand gaps in budding yeast. Alternatively, the Rad5p may be an accessory factor increasing the efficiency of homologous recombination in yeast, however, the molecular mechanism of Rad5p function requires further investigation.

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Year:  1997        PMID: 9016623      PMCID: PMC146520          DOI: 10.1093/nar/25.4.743

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  68 in total

1.  A mechanism for deletion formation in DNA by human cell extracts: the involvement of short sequence repeats.

Authors:  J Thacker; J Chalk; A Ganesh; P North
Journal:  Nucleic Acids Res       Date:  1992-12-11       Impact factor: 16.971

2.  A novel pathway of DNA end-to-end joining.

Authors:  S Thode; A Schäfer; P Pfeiffer; W Vielmetter
Journal:  Cell       Date:  1990-03-23       Impact factor: 41.582

3.  A modified single-strand annealing model best explains the joining of DNA double-strand breaks mammalian cells and cell extracts.

Authors:  A L Nicolás; P L Munz; C S Young
Journal:  Nucleic Acids Res       Date:  1995-03-25       Impact factor: 16.971

4.  Relative contributions of levels of initial DNA damage and repair of double strand breaks to the ionizing radiation-sensitive phenotype of the Chinese hamster cell mutant, XR-V15B. Part I. X-rays.

Authors:  B P Kysela; B D Michael; J E Arrand
Journal:  Int J Radiat Biol       Date:  1993-05       Impact factor: 2.694

Review 5.  The mechanism of V(D)J joining: lessons from molecular, immunological, and comparative analyses.

Authors:  S M Lewis
Journal:  Adv Immunol       Date:  1994       Impact factor: 3.543

6.  Bridging the gap. Joining of nonhomologous ends by DNA polymerases.

Authors:  J S King; C F Fairley; W F Morgan
Journal:  J Biol Chem       Date:  1994-05-06       Impact factor: 5.157

7.  Nonhomologous DNA end joining in Schizosaccharomyces pombe efficiently eliminates DNA double-strand-breaks from haploid sequences.

Authors:  W Goedecke; P Pfeiffer; W Vielmetter
Journal:  Nucleic Acids Res       Date:  1994-06-11       Impact factor: 16.971

8.  Characterization of DNA end joining in a mammalian cell nuclear extract: junction formation is accompanied by nucleotide loss, which is limited and uniform but not site specific.

Authors:  A L Nicolás; C S Young
Journal:  Mol Cell Biol       Date:  1994-01       Impact factor: 4.272

Review 9.  DNA double-strand break repair and V(D)J recombination: involvement of DNA-PK.

Authors:  S P Jackson; P A Jeggo
Journal:  Trends Biochem Sci       Date:  1995-10       Impact factor: 13.807

10.  Effect of mutations in genes affecting homologous recombination on restriction enzyme-mediated and illegitimate recombination in Saccharomyces cerevisiae.

Authors:  R H Schiestl; J Zhu; T D Petes
Journal:  Mol Cell Biol       Date:  1994-07       Impact factor: 4.272

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  18 in total

1.  A genomics-based screen for yeast mutants with an altered recombination/end-joining repair ratio.

Authors:  Thomas E Wilson
Journal:  Genetics       Date:  2002-10       Impact factor: 4.562

2.  RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.

Authors:  Anja Mannuss; Stefanie Dukowic-Schulze; Stefanie Suer; Frank Hartung; Michael Pacher; Holger Puchta
Journal:  Plant Cell       Date:  2010-10-22       Impact factor: 11.277

3.  A genome-wide screen for methyl methanesulfonate-sensitive mutants reveals genes required for S phase progression in the presence of DNA damage.

Authors:  Michael Chang; Mohammed Bellaoui; Charles Boone; Grant W Brown
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-13       Impact factor: 11.205

4.  Homologous recombinational repair of double-strand breaks in yeast is enhanced by MAT heterozygosity through yKU-dependent and -independent mechanisms.

Authors:  J A Clikeman; G J Khalsa; S L Barton; J A Nickoloff
Journal:  Genetics       Date:  2001-02       Impact factor: 4.562

5.  Repair of intermediate structures produced at DNA interstrand cross-links in Saccharomyces cerevisiae.

Authors:  P J McHugh; W R Sones; J A Hartley
Journal:  Mol Cell Biol       Date:  2000-05       Impact factor: 4.272

6.  Postreplication repair and PCNA modification in Schizosaccharomyces pombe.

Authors:  Jonathan Frampton; Anja Irmisch; Catherine M Green; Andrea Neiss; Michelle Trickey; Helle D Ulrich; Kanji Furuya; Felicity Z Watts; Antony M Carr; Alan R Lehmann
Journal:  Mol Biol Cell       Date:  2006-04-26       Impact factor: 4.138

7.  Requirement for the SRS2 DNA helicase gene in non-homologous end joining in yeast.

Authors:  V Hegde; H Klein
Journal:  Nucleic Acids Res       Date:  2000-07-15       Impact factor: 16.971

8.  SIR functions are required for the toleration of an unrepaired double-strand break in a dispensable yeast chromosome.

Authors:  C B Bennett; J R Snipe; J W Westmoreland; M A Resnick
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

Review 9.  Multiple pathways of recombination induced by double-strand breaks in Saccharomyces cerevisiae.

Authors:  F Pâques; J E Haber
Journal:  Microbiol Mol Biol Rev       Date:  1999-06       Impact factor: 11.056

10.  Post-replication repair suppresses duplication-mediated genome instability.

Authors:  Christopher D Putnam; Tikvah K Hayes; Richard D Kolodner
Journal:  PLoS Genet       Date:  2010-05-06       Impact factor: 5.917

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