Literature DB >> 9016612

An effective method of RNA extraction from bacteria refractory to disruption, including mycobacteria.

J A Mangan1, K M Sole, D A Mitchison, P D Butcher.   

Abstract

A high yield, rapid and simple procedure is described for extracting RNA from mycobacteria and other micro-organisms refractory to disruption. The method yielded 20 microg RNA/109 Mycobacterium bovis BCG, more than 10 times greater than our previous method. Intact full length hsp 70 (dnaK) mRNA was detected by northern blotting and quantitated after heat shock by slot blot hybridisation.

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Year:  1997        PMID: 9016612      PMCID: PMC146465          DOI: 10.1093/nar/25.3.675

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  6 in total

1.  A method to isolate RNA from gram-positive bacteria and mycobacteria.

Authors:  A L Cheung; K J Eberhardt; V A Fischetti
Journal:  Anal Biochem       Date:  1994-11-01       Impact factor: 3.365

2.  An efficient and high-yielding method for isolation of RNA from mycobacteria.

Authors:  M D Bashyam; A Tyagi
Journal:  Biotechniques       Date:  1994-11       Impact factor: 1.993

3.  Isolation of RNA from Mycobacterium tuberculosis using a nitrogen decompression chamber.

Authors:  L C Kikuta-Oshima; F D Quinn; W R Butler; T M Shinnick; C H King
Journal:  Biotechniques       Date:  1995-06       Impact factor: 1.993

4.  A rapid protocol for isolation of RNA from mycobacteria.

Authors:  M Rajagopalan; V Boggaram; M V Madiraju
Journal:  Lett Appl Microbiol       Date:  1995-07       Impact factor: 2.858

Review 5.  Structure of mycobacteria: recent developments in defining cell wall carbohydrates and proteins.

Authors:  P J Brennan
Journal:  Rev Infect Dis       Date:  1989 Mar-Apr

6.  Detection of viable Vibrio cholerae by reverse-transcriptase polymerase chain reaction (RT-PCR).

Authors:  A K Bej; W Y Ng; S Morgan; D D Jones; M H Mahbubani
Journal:  Mol Biotechnol       Date:  1996-02       Impact factor: 2.695

  6 in total
  36 in total

Review 1.  Mycobacteria: bugs and bugbears (two steps forward and one step back).

Authors:  T Parish; N G Stoker
Journal:  Mol Biotechnol       Date:  1999-12-15       Impact factor: 2.695

2.  A motif co-occurrence approach for genome-wide prediction of transcription-factor-binding sites in Escherichia coli.

Authors:  Martha L Bulyk; Abigail M McGuire; Nobuhisa Masuda; George M Church
Journal:  Genome Res       Date:  2004-02       Impact factor: 9.043

3.  Transcription of the stationary-phase-associated hspX gene of Mycobacterium tuberculosis is inversely related to synthesis of the 16-kilodalton protein.

Authors:  Y Hu; A R Coates
Journal:  J Bacteriol       Date:  1999-03       Impact factor: 3.490

4.  Examining the basis of isoniazid tolerance in nonreplicating Mycobacterium tuberculosis using transcriptional profiling.

Authors:  Griselda Tudó; Ken Laing; Denis A Mitchison; Philip D Butcher; Simon J Waddell
Journal:  Future Med Chem       Date:  2010-08       Impact factor: 3.808

5.  Approaches to bacterial RNA isolation and purification for microarray analysis of Escherichia coli K1 interaction with human brain microvascular endothelial cells.

Authors:  Francescopaolo Di Cello; Yi Xie; Maneesh Paul-Satyaseela; Kwang Sik Kim
Journal:  J Clin Microbiol       Date:  2005-08       Impact factor: 5.948

6.  Transcription of two sigma 70 homologue genes, sigA and sigB, in stationary-phase Mycobacterium tuberculosis.

Authors:  Y Hu; A R Coates
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

7.  Detection of mRNA by reverse transcription-PCR as an indicator of viability in Escherichia coli cells.

Authors:  G E Sheridan; C I Masters; J A Shallcross; B M MacKey
Journal:  Appl Environ Microbiol       Date:  1998-04       Impact factor: 4.792

8.  Characterization of the RNA polymerase α subunit operon from Corynebacterium ammoniagenes.

Authors:  Jeong Hyun Kim; Sun Hee Ham; Baek Rak Lee
Journal:  World J Microbiol Biotechnol       Date:  2011-09-17       Impact factor: 3.312

Review 9.  RNA profiling in host-pathogen interactions.

Authors:  Simon J Waddell; Philip D Butcher; Neil G Stoker
Journal:  Curr Opin Microbiol       Date:  2007-06-15       Impact factor: 7.934

10.  Regulation of the CRISPR-Associated Genes by Rv2837c (CnpB) via an Orn-Like Activity in Tuberculosis Complex Mycobacteria.

Authors:  Yang Zhang; Jun Yang; Guangchun Bai
Journal:  J Bacteriol       Date:  2018-03-26       Impact factor: 3.490

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