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Literature DB >> 9016511

Small RNA database.

Abstract

The small RNA database is a compilation of all the small size RNA sequences available to date, including nuclear, nucleolar, cytoplasmic and mitochondrial small RNAs from eukaryotic organisms and small RNAs from prokaryotic cells as well as viruses. Currently, about 600 small RNA sequences are in our database. It also gives the sources of individual RNAs and their GenBank accession numbers. The small RNA database can be accessed through WWW(World Wide Web). Our WWW URL address is: http://mbcr.bcm.tmc.edu/smallRNA/smallrna. html . The new small RNA sequences published since our last compilation are listed in this paper.

Mesh：

Substances：
RNA, Small Nuclear
RNA

Year: 1997 PMID： 9016511 PMCID： PMC146407 DOI： 10.1093/nar/25.1.98

Source DB: PubMed Journal: Nucleic Acids Res ISSN： 0305-1048 Impact factor: 16.971

32 in total

1. Sporadic amplification of ID elements in rodents.

Authors: D H Kass; J Kim; P L Deininger
Journal: J Mol Evol Date: 1996-01 Impact factor: 2.395

2. The gene for human E2 small nucleolar RNA resides in an intron of a laminin-binding protein gene.

Authors: N Selvamurugan; G L Eliceiri
Journal: Genomics Date: 1995-11-20 Impact factor: 5.736

3. Small RNA database.

Authors: J Gu; R Reddy
Journal: Nucleic Acids Res Date: 1996-01-01 Impact factor: 16.971

4. Intronic U14 snoRNAs of Xenopus laevis are located in two different parent genes and can be processed from their introns during early oogenesis.

Authors: L Xia; J Liu; C Sage; E B Trexler; M T Andrews; E S Maxwell
Journal: Nucleic Acids Res Date: 1995-12-11 Impact factor: 16.971

10. Structure of the Leptomonas seymouri trans-spliceosomal U2 snRNA-encoding gene; potential U2-U6 snRNA interactions conform to the cis-splicing counterpart.

Authors: P He; V Bellofatto
Journal: Gene Date: 1995-11-07 Impact factor: 3.688

3 in total

Small RNA database.

1. Sporadic amplification of ID elements in rodents.

2. The gene for human E2 small nucleolar RNA resides in an intron of a laminin-binding protein gene.

3. Small RNA database.

4. Intronic U14 snoRNAs of Xenopus laevis are located in two different parent genes and can be processed from their introns during early oogenesis.

5. Unexpected diversity in U6 snRNA sequences from trypanosomatids.

6. Cloning and characterization of three new murine genes encoding short homologues of RNase P RNA.

7. U1 snRNA variants coexist in Bombyx mori cells.

8. A mammalian gene with introns instead of exons generating stable RNA products.

9. Characterization of the highly divergent U2 RNA homolog in the microsporidian Vairimorpha necatrix.

10. Structure of the Leptomonas seymouri trans-spliceosomal U2 snRNA-encoding gene; potential U2-U6 snRNA interactions conform to the cis-splicing counterpart.

1. Functional mapping of the U3 small nucleolar RNA from the yeast Saccharomyces cerevisiae.

2. Small RNA database.

3. Nucleolar localization elements of Xenopus laevis U3 small nucleolar RNA.