Literature DB >> 9008840

Complete 1H and 13C resonance assignments of a 21-amino acid glycopeptide prepared from human serum transferrin.

J Lu1, H van Halbeek.   

Abstract

A 21-amino acid glycopeptide (Gp21) was isolated and purified in multi-milligram yields from commercially available human serum transferrin (HSTF) by a combination of tryptic digestion, Con A affinity chromatography, and reverse phase HPLC. The peptide chain of Gp21 contains a single N-glycosylation site to which a diantennary oligosaccharide is attached. The amino acid sequence and the glycan primary structure of Gp21 have been verified by peptide sequencing, electrospray mass spectrometry, and one-dimensional 1H NMR spectroscopy. Different glycoforms were found for the glycan of Gp21 derived from two different batches of commercial HSTF. These glycoforms differ from one another in the number of NeuAc residues (ranging from 0 to 2) and/or the number of Gal residues (ranging from 1 to 2). As for the monogalacto species, in the two-dimensional nuclear Overhauser effect (NOE) spectrum of Gp21, interglycosidic NOEs were observed between Man4 in the alpha (1-->3) branch and the terminal GlcNAc beta (1-->2) residue. No interglycosidic NOE was observed between Man4' in the alpha (1-->6) branch and the terminal GlcNAc residue. These observations indicate that the terminal GlcNAc residue in the minor glycoforms of Gp21 is exclusively located in the alpha (1-->3) branch of the Gp21 glycan. The occurrence of such a carbohydrate structure in HSTF has not been reported before. The 1H and 13C NMR spectra of Gp21 have been completely assigned by two-dimensional homonuclear and heteronuclear spectroscopy. The close similarity of the 1H and 13C chemical shift values for the Gp21 glycan with the respective values for the peptide-free diantennary oligosaccharide (Wieruszeski et al., Glycoconjugate J., 6 (1989) 183-194) indicates that the 1H and 13C chemical shifts of the diantennary oligosaccharide are not perturbed by the presence of the Gp21 peptide fragment. The complete 1H and 13C resonance assignments and the full characterization of the primary structure of Gp21 will permit us to study the conformation and dynamics of the N-linked diantennary oligosaccharides while covalently attached to a polypeptide fragment.

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Year:  1996        PMID: 9008840     DOI: 10.1016/s0008-6215(96)00240-6

Source DB:  PubMed          Journal:  Carbohydr Res        ISSN: 0008-6215            Impact factor:   2.104


  5 in total

1.  Mass Spectrometric Quantification of N-Linked Glycans by Reference to Exogenous Standards.

Authors:  Nickita Mehta; Mindy Porterfield; Weston B Struwe; Christian Heiss; Parastoo Azadi; Pauline M Rudd; Michael Tiemeyer; Kazuhiro Aoki
Journal:  J Proteome Res       Date:  2016-08-05       Impact factor: 4.466

2.  1H and 13C NMR assignments for the glycans in glycoproteins by using 2H/13C-labeled glucose as a metabolic precursor.

Authors:  Y Yamaguchi; T Takizawa; K Kato; Y Arata; I Shimada
Journal:  J Biomol NMR       Date:  2000-12       Impact factor: 2.835

3.  Dynamics of the carbohydrate chains attached to the Fc portion of immunoglobulin G as studied by NMR spectroscopy assisted by selective 13C labeling of the glycans.

Authors:  Y Yamaguchi; K Kato; M Shindo; S Aoki; K Furusho; K Koga; N Takahashi; Y Arata; I Shimada
Journal:  J Biomol NMR       Date:  1998-10       Impact factor: 2.835

4.  Proteomic and postproteomic characterization of keratan sulfate-glycanated isoforms of thyroglobulin and transferrin uniquely elaborated by papillary thyroid carcinomas.

Authors:  Gaetano Magro; Daniela Perissinotto; Monica Schiappacassi; Steffen Goletz; Albrecht Otto; Eva-Christina Müller; Michele Bisceglia; Gavin Brown; Timothy Ellis; Sebastiano Grasso; Alfonso Colombatti; Roberto Perris
Journal:  Am J Pathol       Date:  2003-07       Impact factor: 4.307

5.  Chemical Structure and Composition of Major Glycans Covalently Linked to Therapeutic Monoclonal Antibodies by Middle-Down Nuclear Magnetic Resonance.

Authors:  Jiangnan Peng; Sharadrao M Patil; David A Keire; Kang Chen
Journal:  Anal Chem       Date:  2018-08-27       Impact factor: 6.986

  5 in total

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