Literature DB >> 9000635

Thermal unfolding of the DNA-binding protein Sso7d from the hyperthermophile Sulfolobus solfataricus.

S Knapp1, A Karshikoff, K D Berndt, P Christova, B Atanasov, R Ladenstein.   

Abstract

Thermal unfolding of the small hyperthermophilic DNA-binding protein Sso7d was studied by circular dichroism spectroscopy and differential scanning calorimetry. The unfolding transition can be described by a reversible two state process. Maximum stability was observed in the region between pH 4.5 and 7.0 where Sso7d unfolds with a melting temperature between 370.8 to 371.9 K and an unfolding enthalpy between 62.9 and 65.4 kcal/mol. The heat capacity differences between the native and the heat denatured states obtained by differential scanning calorimetry (620 cal/(molK)) and circular dichroism spectroscopy (580 cal/(mol K)) resulted in comparable values. The thermodynamic reason for the high melting temperature of Sso7d is the shallow stability curve with a broad free energy maximum, corresponding to the relatively small heat capacity change which was obtained. The calculated stability curve shows that Sso7d has, despite of its high melting temperature, an only moderate intrinsic stability, which reaches its maximum (approximately 7 kcal/mol) at 282 K. Sso7d is particularly poorly stabilized (approximately 1 kcal/mol) at the maximum physiological growth temperature of Sulfolobus solfataricus. Sso7d has furthermore untypically low specific enthalpy (0.99 kcal/(mol residue)) and entropy (2.99 cal/(mol K)) values at convergence temperatures. No significant differences in thermal stability of the partially methylated Sso7d from Sulfolobus solfataricus and the cloned non-methylated form of the protein expressed in Escherichia coli were observed.

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Year:  1996        PMID: 9000635     DOI: 10.1006/jmbi.1996.0701

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  11 in total

1.  Crystal structure of the hyperthermophilic archaeal DNA-binding protein Sso10b2 at a resolution of 1.85 Angstroms.

Authors:  Chia-Cheng Chou; Ting-Wan Lin; Chin-Yu Chen; Andrew H-J Wang
Journal:  J Bacteriol       Date:  2003-07       Impact factor: 3.490

2.  Toward the physical basis of thermophilic proteins: linking of enriched polar interactions and reduced heat capacity of unfolding.

Authors:  Huan-Xiang Zhou
Journal:  Biophys J       Date:  2002-12       Impact factor: 4.033

3.  A novel strategy to engineer DNA polymerases for enhanced processivity and improved performance in vitro.

Authors:  Yan Wang; Dennis E Prosen; Li Mei; John C Sullivan; Michael Finney; Peter B Vander Horn
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

4.  Insertion of the cytochrome b5 heme-binding loop into an SH3 domain. Effects on structure and stability, and clues about the cytochrome's architecture.

Authors:  Jane A Knappenberger; Christina M Kraemer-Pecore; Juliette T J Lecomte
Journal:  Protein Sci       Date:  2004-09-30       Impact factor: 6.725

Review 5.  Lessons in stability from thermophilic proteins.

Authors:  Abbas Razvi; J Martin Scholtz
Journal:  Protein Sci       Date:  2006-07       Impact factor: 6.725

6.  In vitro DNA binding of the archaeal protein Sso7d induces negative supercoiling at temperatures typical for thermophilic growth.

Authors:  P López-García; S Knapp; R Ladenstein; P Forterre
Journal:  Nucleic Acids Res       Date:  1998-05-15       Impact factor: 16.971

7.  aKMT Catalyzes Extensive Protein Lysine Methylation in the Hyperthermophilic Archaeon Sulfolobus islandicus but is Dispensable for the Growth of the Organism.

Authors:  Yindi Chu; Yanping Zhu; Yuling Chen; Wei Li; Zhenfeng Zhang; Di Liu; Tongkun Wang; Juncai Ma; Haiteng Deng; Zhi-Jie Liu; Songying Ouyang; Li Huang
Journal:  Mol Cell Proteomics       Date:  2016-06-21       Impact factor: 5.911

8.  Thermal and conformational stability of Ssh10b protein from archaeon Sulfolobus shibattae.

Authors:  Su Xu; Sanbo Qin; Xian-Ming Pan
Journal:  Biochem J       Date:  2004-09-01       Impact factor: 3.857

Review 9.  The functional diversity of protein lysine methylation.

Authors:  Sylvain Lanouette; Vanessa Mongeon; Daniel Figeys; Jean-François Couture
Journal:  Mol Syst Biol       Date:  2014-04-08       Impact factor: 11.429

10.  Strong Enrichment of Aromatic Residues in Binding Sites from a Charge-neutralized Hyperthermostable Sso7d Scaffold Library.

Authors:  Michael W Traxlmayr; Jonathan D Kiefer; Raja R Srinivas; Elisabeth Lobner; Alison W Tisdale; Naveen K Mehta; Nicole J Yang; Bruce Tidor; K Dane Wittrup
Journal:  J Biol Chem       Date:  2016-08-30       Impact factor: 5.486

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