Literature DB >> 8989317

The RNA binding domain of ribosomal protein L11 is structurally similar to homeodomains.

Y Xing, D Guha Thakurta, D E Draper.   

Abstract

The RNA binding domain of ribosomal protein L11 is strikingly similar to the homeodomain class of eukaryotic DNA binding proteins: it contains three alpha-helices that superimpose with homeodomain alpha-helices, and some conserved residues required for rRNA recognition align with homeodomain helix III residues contacting DNA bases.

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Year:  1997        PMID： 8989317     DOI： 10.1038/nsb0197-24

Source DB:  PubMed          Journal:  Nat Struct Biol        ISSN： 1072-8368


  10 in total

1.  Crystal structure of ERA: a GTPase-dependent cell cycle regulator containing an RNA binding motif.

Authors:  X Chen; D L Court; X Ji
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

2.  Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon.

Authors:  M Worbs; R Huber; M C Wahl
Journal:  EMBO J       Date:  2000-03-01       Impact factor: 11.598

3.  Structure of Hsp15 reveals a novel RNA-binding motif.

Authors:  B L Staker; P Korber; J C Bardwell; M A Saper
Journal:  EMBO J       Date:  2000-02-15       Impact factor: 11.598

4.  The structure and enzymatic properties of a novel RNase II family enzyme from Deinococcus radiodurans.

Authors:  Brad J Schmier; Jayaraman Seetharaman; Murray P Deutscher; John F Hunt; Arun Malhotra
Journal:  J Mol Biol       Date:  2011-11-23       Impact factor: 5.469

5.  Ribosomal Protein L11 Selectively Stabilizes a Tertiary Structure of the GTPase Center rRNA Domain.

Authors:  Robb Welty; Michael Rau; Suzette Pabit; Mark S Dunstan; Graeme L Conn; Lois Pollack; Kathleen B Hall
Journal:  J Mol Biol       Date:  2019-12-24       Impact factor: 5.469

6.  Structural and functional studies on the overproduced L11 protein from Thermus thermophilus.

Authors:  D Triantafillidou; M Simitsopoulou; F Franceschi; T Choli-Papadopoulou
Journal:  J Protein Chem       Date:  1999-02

7.  Optimization of a ribosomal structural domain by natural selection.

Authors:  Corina Maeder; Graeme L Conn; David E Draper
Journal:  Biochemistry       Date:  2006-05-30       Impact factor: 3.162

8.  RNA binding by the novel helical domain of the influenza virus NS1 protein requires its dimer structure and a small number of specific basic amino acids.

Authors:  W Wang; K Riedel; P Lynch; C Y Chien; G T Montelione; R M Krug
Journal:  RNA       Date:  1999-02       Impact factor: 4.942

9.  Solution structure of the antitermination protein NusB of Escherichia coli: a novel all-helical fold for an RNA-binding protein.

Authors:  M Huenges; C Rölz; R Gschwind; R Peteranderl; F Berglechner; G Richter; A Bacher; H Kessler; G Gemmecker
Journal:  EMBO J       Date:  1998-07-15       Impact factor: 11.598

10.  L11 domain rearrangement upon binding to RNA and thiostrepton studied by NMR spectroscopy.

Authors:  Hendrik R A Jonker; Serge Ilin; S Kaspar Grimm; Jens Wöhnert; Harald Schwalbe
Journal:  Nucleic Acids Res       Date:  2006-12-14       Impact factor: 16.971
  10 in total

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