Literature DB >> 8947671

Utilizing OODB schema modeling for vocabulary management.

H Gu1, J J Cimino, M Halper, J Geller, Y Perl.   

Abstract

Comprehension of complex controlled vocabularies is often difficult. We present a method, facilitated by an object-oriented database, for depicting such a vocabulary (the Medical Entities Dictionary (MED) from the Columbia-Presbyterian Medical Center) in a schematic way which uses a sparse inheritance network of area classes. The resulting Object Oriented Health Vocabulary repository (OOHVR) allows visualization of the 43,000 MED concepts as 90 area classes. This view has provided valuable information to those responsible with maintaining the MED. As a result, the MED organization has been improved and some previously-unrecognized errors and inconsistencies have been removed. We believe that this schematic approach allows improved comprehension of the gestalt of large controlled medical vocabulary.

Mesh:

Year:  1996        PMID: 8947671      PMCID: PMC2233034     

Source DB:  PubMed          Journal:  Proc AMIA Annu Fall Symp        ISSN: 1091-8280


  3 in total

1.  Access to data: comparing AccessMed with Query by Review.

Authors:  G Hripcsak; B Allen; J J Cimino; R Lee
Journal:  J Am Med Inform Assoc       Date:  1996 Jul-Aug       Impact factor: 4.497

2.  Portability issues for a structured clinical vocabulary: mapping from Yale to the Columbia medical entities dictionary.

Authors:  J L Kannry; L Wright; M Shifman; S Silverstein; P L Miller
Journal:  J Am Med Inform Assoc       Date:  1996 Jan-Feb       Impact factor: 4.497

3.  Knowledge-based approaches to the maintenance of a large controlled medical terminology.

Authors:  J J Cimino; P D Clayton; G Hripcsak; S B Johnson
Journal:  J Am Med Inform Assoc       Date:  1994 Jan-Feb       Impact factor: 4.497

  3 in total
  11 in total

1.  Representing the UMLS as an object-oriented database: modeling issues and advantages.

Authors:  H Gu; Y Perl; J Geller; M Halper; L M Liu; J J Cimino
Journal:  J Am Med Inform Assoc       Date:  2000 Jan-Feb       Impact factor: 4.497

2.  Benefits of an object-oriented database representation for controlled medical terminologies.

Authors:  H Gu; M Halper; J Geller; Y Perl
Journal:  J Am Med Inform Assoc       Date:  1999 Jul-Aug       Impact factor: 4.497

3.  An object-oriented model for representing semantic locality in the UMLS.

Authors:  O Bodenreider
Journal:  Stud Health Technol Inform       Date:  2001

4.  From data to knowledge through concept-oriented terminologies: experience with the Medical Entities Dictionary.

Authors:  J J Cimino
Journal:  J Am Med Inform Assoc       Date:  2000 May-Jun       Impact factor: 4.497

Review 5.  A review of auditing methods applied to the content of controlled biomedical terminologies.

Authors:  Xinxin Zhu; Jung-Wei Fan; David M Baorto; Chunhua Weng; James J Cimino
Journal:  J Biomed Inform       Date:  2009-03-12       Impact factor: 6.317

6.  Converting an integrated hospital formulary into an object-oriented database representation.

Authors:  H Gu; L M Liu; M Halper; J Geller; Y Perl
Journal:  Proc AMIA Symp       Date:  1998

7.  The Healthcare Administrator's Associate: an experiment in distributed healthcare information systems.

Authors:  J Fowler; G Martin
Journal:  Proc AMIA Annu Fall Symp       Date:  1997

8.  A family-based framework for supporting quality assurance of biomedical ontologies in BioPortal.

Authors:  Zhe He; Christopher Ochs; Ankur Agrawal; Yehoshua Perl; Dimitris Zeginis; Konstantinos Tarabanis; Gai Elhanan; Michael Halper; Natasha Noy; James Geller
Journal:  AMIA Annu Symp Proc       Date:  2013-11-16

Review 9.  Abstraction networks for terminologies: Supporting management of "big knowledge".

Authors:  Michael Halper; Huanying Gu; Yehoshua Perl; Christopher Ochs
Journal:  Artif Intell Med       Date:  2015-04-02       Impact factor: 5.326

10.  OWL-NETS: Transforming OWL Representations for Improved Network Inference.

Authors:  Tiffany J Callahan; William A Baumgartner; Michael Bada; Adrianne L Stefanski; Ignacio Tripodi; Elizabeth K White; Lawrence E Hunter
Journal:  Pac Symp Biocomput       Date:  2018
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