Literature DB >> 8947053

Smooth muscle alternative splicing induced in fibroblasts by heterologous expression of a regulatory gene.

G C Roberts1, C Gooding, C W Smith.   

Abstract

Alternative splicing is a common mechanism for regulating gene expression in different cell types. In order to understand this important process, the trans-acting factors that enforce the choice of particular splicing pathways in different environments must be identified. We have used the rat alpha-tropomyosin gene as a model system of tissue-specific alternative splicing. Exon 3 of alpha-tropomyosin is specifically inhibited in smooth muscle cells allowing the alternative inclusion of exon 2. We have used a novel gene transfer and selection strategy to detect a gene whose expression in fibroblasts is sufficient to switch them to smooth muscle-specific splicing of alpha-tropomyosin and also alpha-actinin. Extracts from the regulating fibroblasts contain an apparently novel 55 kDa protein which binds to RNA elements required for regulation of tropomyosin splicing. This protein is not detected in extracts of non-regulating cells and is therefore a strong candidate cell-specific splicing regulator. These experiments advance our understanding of smooth muscle splicing regulation as well as establishing a means for direct cloning of tissue-specific splicing regulators which have so far been refractory to biochemical analysis.

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Year:  1996        PMID: 8947053      PMCID: PMC452453     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  40 in total

1.  A protein tyrosine kinase in the interferon alpha/beta signaling pathway.

Authors:  L Velazquez; M Fellous; G R Stark; S Pellegrini
Journal:  Cell       Date:  1992-07-24       Impact factor: 41.582

2.  Mutually exclusive splicing of alpha-tropomyosin exons enforced by an unusual lariat branch point location: implications for constitutive splicing.

Authors:  C W Smith; B Nadal-Ginard
Journal:  Cell       Date:  1989-03-10       Impact factor: 41.582

3.  Identification of a functional mammalian spliceosome containing unspliced pre-mRNA.

Authors:  S M Abmayr; R Reed; T Maniatis
Journal:  Proc Natl Acad Sci U S A       Date:  1988-10       Impact factor: 11.205

4.  Organization of the human gene encoding the cytoskeletal protein vinculin and the sequence of the vinculin promoter.

Authors:  E P Moiseyeva; P A Weller; N I Zhidkova; E B Corben; B Patel; I Jasinska; V E Koteliansky; D R Critchley
Journal:  J Biol Chem       Date:  1993-02-25       Impact factor: 5.157

5.  Isolation of the chicken thymidine kinase gene by plasmid rescue.

Authors:  M Perucho; D Hanahan; L Lipsich; M Wigler
Journal:  Nature       Date:  1980-05-22       Impact factor: 49.962

6.  The V(D)J recombination activating gene, RAG-1.

Authors:  D G Schatz; M A Oettinger; D Baltimore
Journal:  Cell       Date:  1989-12-22       Impact factor: 41.582

7.  The protein Sex-lethal antagonizes the splicing factor U2AF to regulate alternative splicing of transformer pre-mRNA.

Authors:  J Valcárcel; R Singh; P D Zamore; M R Green
Journal:  Nature       Date:  1993-03-11       Impact factor: 49.962

8.  Development and characterization of a cloned rat pulmonary arterial smooth muscle cell line that maintains differentiated properties through multiple subcultures.

Authors:  A Rothman; T J Kulik; M B Taubman; B C Berk; C W Smith; B Nadal-Ginard
Journal:  Circulation       Date:  1992-12       Impact factor: 29.690

9.  Genomic structure of the human caldesmon gene.

Authors:  K Hayashi; H Yano; T Hashida; R Takeuchi; O Takeda; K Asada; E Takahashi; I Kato; K Sobue
Journal:  Proc Natl Acad Sci U S A       Date:  1992-12-15       Impact factor: 11.205

10.  Polypyrimidine tract binding protein interacts with sequences involved in alternative splicing of beta-tropomyosin pre-mRNA.

Authors:  G J Mulligan; W Guo; S Wormsley; D M Helfman
Journal:  J Biol Chem       Date:  1992-12-15       Impact factor: 5.157

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  15 in total

1.  A double reporter assay for detecting changes in the ratio of spliced and unspliced mRNA in mammalian cells.

Authors:  Md Talat Nasim; H M Chowdhury; I C Eperon
Journal:  Nucleic Acids Res       Date:  2002-10-15       Impact factor: 16.971

Review 2.  Understanding the language of Lys36 methylation at histone H3.

Authors:  Eric J Wagner; Phillip B Carpenter
Journal:  Nat Rev Mol Cell Biol       Date:  2012-01-23       Impact factor: 94.444

3.  An apparent pseudo-exon acts both as an alternative exon that leads to nonsense-mediated decay and as a zero-length exon.

Authors:  Sushma-Nagaraja Grellscheid; Christopher W J Smith
Journal:  Mol Cell Biol       Date:  2006-03       Impact factor: 4.272

4.  Use of transcriptional synergy to augment sensitivity of a splicing reporter assay.

Authors:  Noah Levinson; Rochelle Hinman; Ashwini Patil; Corey R J Stephenson; Stefan Werner; Grace H C Woo; Jingbo Xiao; Peter Wipf; Kristen W Lynch
Journal:  RNA       Date:  2006-03-23       Impact factor: 4.942

5.  The transcription-dependent dissociation of P-TEFb-HEXIM1-7SK RNA relies upon formation of hnRNP-7SK RNA complexes.

Authors:  Charlotte Barrandon; François Bonnet; Van Trung Nguyen; Valérie Labas; Olivier Bensaude
Journal:  Mol Cell Biol       Date:  2007-08-20       Impact factor: 4.272

6.  Role of an inhibitory pyrimidine element and polypyrimidine tract binding protein in repression of a regulated alpha-tropomyosin exon.

Authors:  C Gooding; G C Roberts; C W Smith
Journal:  RNA       Date:  1998-01       Impact factor: 4.942

7.  Polypyrimidine tract binding protein functions as a repressor to regulate alternative splicing of alpha-actinin mutally exclusive exons.

Authors:  J Southby; C Gooding; C W Smith
Journal:  Mol Cell Biol       Date:  1999-04       Impact factor: 4.272

8.  A splicing silencer that regulates smooth muscle specific alternative splicing is active in multiple cell types.

Authors:  Natalia Gromak; Christopher W J Smith
Journal:  Nucleic Acids Res       Date:  2002-08-15       Impact factor: 16.971

9.  Transposable element insertions respecify alternative exon splicing in three Drosophila myosin heavy chain mutants.

Authors:  M B Davis; J Dietz; D M Standiford; C P Emerson
Journal:  Genetics       Date:  1998-11       Impact factor: 4.562

10.  Identification of cells deficient in signaling-induced alternative splicing by use of somatic cell genetics.

Authors:  Paul Sheives; Kristen W Lynch
Journal:  RNA       Date:  2002-12       Impact factor: 4.942

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