Literature DB >> 894678

Hydrogen-bonding parameter and its significance in quantitative structure--activity studies.

T Fujita, T Nishioka, M Nakajima.   

Abstract

When the relative hydrogen-bonding effect of drugs on phases involved in the binding at the site of biological action differs from that in the 1-octanol-H2O partitioning phases used as the reference to estimate the hydrophobicity, a parameter (or parameters) which represents the "extra" hydrogen-bonding effect on the biological activity is required in the Hansch-type correlations. As a first approximation, the effect is analyzed in terms of the ratio of hydrogen-bonding association constants and the ratio of molarities of hydrogen-bonding species constituting the biological and organic phases. Sometimes, the association constants in both phases are so similar that they are not important in determining the extra hydrogen-bonding effect. The net result is that the effect is expressible by an indicator variable term the slope of which corresponds to the molarity ratio. The variable only applies to substituents having appreciable association capability in correlating a certain biological action exhibited by a series of congeners.

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Year:  1977        PMID: 894678     DOI: 10.1021/jm00218a017

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  9 in total

1.  Fast estimation of hydrogen-bonding donor and acceptor propensities: a GMIPp study.

Authors:  Albert Salichs; M López; V Segarra; Modesto Orozco; F Javier Luque
Journal:  J Comput Aided Mol Des       Date:  2002 Aug-Sep       Impact factor: 3.686

2.  A new method for estimating the importance of hydrogen-bonding groups in the binding site of a protein.

Authors:  Matthew D Kelly; Ricardo L Mancera
Journal:  J Comput Aided Mol Des       Date:  2003-07       Impact factor: 3.686

3.  Development of a preformulation lipophilicity screen utilizing a C-18-derivatized polystyrene-divinylbenzene high-performance liquid chromatographic (HPLC) column.

Authors:  W J Lambert; L A Wright; J K Stevens
Journal:  Pharm Res       Date:  1990-06       Impact factor: 4.200

4.  Outliers in SAR and QSAR: 3. Importance of considering the role of water molecules in protein-ligand interactions and quantitative structure-activity relationship studies.

Authors:  Ki Hwan Kim
Journal:  J Comput Aided Mol Des       Date:  2021-03-13       Impact factor: 3.686

Review 5.  Quantitative structure-activity relationships of insecticides and plant growth regulators: comparative studies toward understanding the molecular mechanism of action.

Authors:  H Iwamura; K Nishimura; T Fujita
Journal:  Environ Health Perspect       Date:  1985-09       Impact factor: 9.031

Review 6.  Partitioning and lipophilicity in quantitative structure-activity relationships.

Authors:  J C Dearden
Journal:  Environ Health Perspect       Date:  1985-09       Impact factor: 9.031

Review 7.  PCBs: structure-function relationships and mechanism of action.

Authors:  S Safe; S Bandiera; T Sawyer; L Robertson; L Safe; A Parkinson; P E Thomas; D E Ryan; L M Reik; W Levin
Journal:  Environ Health Perspect       Date:  1985-05       Impact factor: 9.031

Review 8.  Effects of structure on binding to the 2,3,7,8-TCDD receptor protein and AHH induction--halogenated biphenyls.

Authors:  S Safe; S Bandiera; T Sawyer; B Zmudzka; G Mason; M Romkes; M A Denomme; J Sparling; A B Okey; T Fujita
Journal:  Environ Health Perspect       Date:  1985-09       Impact factor: 9.031

9.  Structure based virtual screening identifies small molecule effectors for the sialoglycan binding protein Hsa.

Authors:  Rupesh Agarwal; Barbara A Bensing; Dehui Mi; Paige N Vinson; Jerome Baudry; Tina M Iverson; Jeremy C Smith
Journal:  Biochem J       Date:  2020-10-16       Impact factor: 3.766

  9 in total

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