Literature DB >> 8921628

A common-lines based method for determining orientations for N > 3 particle projections simultaneously.

P A Penczek1, J Zhu, J Frank.   

Abstract

A method is proposed for determining the directions of projections. An arbitrary number of projections of unknown three-dimensional structure are simultaneously used as input. The method is based on common lines and uses a new discrepancy measure accounting for the uneven distribution of common lines in angular space. An application to the 70S Escherichia coli ribosome data obtained from an energy-filtering electron microscope is described.

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Year:  1996        PMID: 8921628     DOI: 10.1016/0304-3991(96)00037-x

Source DB:  PubMed          Journal:  Ultramicroscopy        ISSN: 0304-3991            Impact factor:   2.689


  40 in total

1.  Variable symmetry in Salmonella typhimurium flagellar motors.

Authors:  Howard S Young; Hongyue Dang; Yimin Lai; David J DeRosier; Shahid Khan
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

2.  Orientation Determination of Cryo-EM Images Using Least Unsquared Deviations.

Authors:  Lanhui Wang; Amit Singer; Zaiwen Wen
Journal:  SIAM J Imaging Sci       Date:  2013-12-03       Impact factor: 2.867

3.  Architecture of the bacteriophage T4 primosome: electron microscopy studies of helicase (gp41) and primase (gp61).

Authors:  Mona T Norcum; J Anthony Warrington; Michelle M Spiering; Faoud T Ishmael; Michael A Trakselis; Stephen J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-28       Impact factor: 11.205

4.  Three-Dimensional Structure Determination from Common Lines in Cryo-EM by Eigenvectors and Semidefinite Programming().

Authors:  A Singer; Y Shkolnisky
Journal:  SIAM J Imaging Sci       Date:  2011-06-07       Impact factor: 2.867

5.  Structural organization of the anaphase-promoting complex bound to the mitotic activator Slp1.

Authors:  Melanie D Ohi; Anna Feoktistova; Liping Ren; Calvin Yip; Yifan Cheng; Jun-Song Chen; Hyun-Joo Yoon; Joseph S Wall; Zhong Huang; Pawel A Penczek; Kathleen L Gould; Thomas Walz
Journal:  Mol Cell       Date:  2007-12-14       Impact factor: 17.970

Review 6.  3D electron microscopy of biological nanomachines: principles and applications.

Authors:  C O S Sorzano; S Jonic; M Cottevieille; E Larquet; N Boisset; S Marco
Journal:  Eur Biophys J       Date:  2007-07-05       Impact factor: 1.733

7.  Visualization of macromolecular complexes using cryo-electron microscopy with FEI Tecnai transmission electron microscopes.

Authors:  Robert A Grassucci; Derek Taylor; Joachim Frank
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

8.  SPIDER image processing for single-particle reconstruction of biological macromolecules from electron micrographs.

Authors:  Tanvir R Shaikh; Haixiao Gao; William T Baxter; Francisco J Asturias; Nicolas Boisset; Ardean Leith; Joachim Frank
Journal:  Nat Protoc       Date:  2008       Impact factor: 13.491

9.  Rubisco in complex with Rubisco large subunit methyltransferase.

Authors:  Stefan Raunser; Roberta Magnani; Zhong Huang; Robert L Houtz; Raymond C Trievel; Pawel A Penczek; Thomas Walz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-10       Impact factor: 11.205

10.  Expression, purification and structural properties of ABC transporter ABCA4 and its individual domains.

Authors:  Yaroslav Tsybovsky; Krzysztof Palczewski
Journal:  Protein Expr Purif       Date:  2014-02-28       Impact factor: 1.650

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