Literature DB >> 8918808

Evidence for a HeLa nuclear protein that binds specifically to the single-stranded d(CCCTAA)n telomeric motif.

E Marsich1, A Piccini, L E Xodo, G Manzini.   

Abstract

In recent years several telomere binding proteins from eukaryotic organisms have been identified that are able to recognise specifically the duplex telomeric DNA repeat or the G-rich 3'-ending single strand. In this paper we present experimental evidence that HeLa nuclear extracts contain a protein that binds with high specificity to the single-stranded complementary d(CCCTAA)n repeat. Electrophoretic mobility shift assays show that the oligonucleotide d(CCCTAACCCTAACCCTAACCCT) forms a stable complex with this protein in the presence of up to 1000-fold excesses of single-stranded DNA and RNA competitors, but is prevented from doing so in the presence of its complementary strand. SDS-PAGE experiments after UV cross-linking of the complex provide an estimate of 50 kDa for the molecular weight of this protein.

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Year:  1996        PMID: 8918808      PMCID: PMC146212          DOI: 10.1093/nar/24.20.4029

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  26 in total

1.  Crystal structure of four-stranded Oxytricha telomeric DNA.

Authors:  C Kang; X Zhang; R Ratliff; R Moyzis; A Rich
Journal:  Nature       Date:  1992-03-12       Impact factor: 49.962

2.  Characterization of a telomere-binding protein from Physarum polycephalum.

Authors:  J S Coren; E M Epstein; V M Vogt
Journal:  Mol Cell Biol       Date:  1991-04       Impact factor: 4.272

3.  Nucleic acid specificity of a vertebrate telomere-binding protein: evidence for G-G base pair recognition at the core-binding site.

Authors:  A Gualberto; R M Patrick; K Walsh
Journal:  Genes Dev       Date:  1992-05       Impact factor: 11.361

4.  Monovalent cation-induced structure of telomeric DNA: the G-quartet model.

Authors:  J R Williamson; M K Raghuraman; T R Cech
Journal:  Cell       Date:  1989-12-01       Impact factor: 41.582

5.  Assembly and self-association of oxytricha telomeric nucleoprotein complexes.

Authors:  M K Raghuraman; T R Cech
Journal:  Cell       Date:  1989-11-17       Impact factor: 41.582

6.  A Xenopus egg factor with DNA-binding properties characteristic of terminus-specific telomeric proteins.

Authors:  M E Cardenas; A Bianchi; T de Lange
Journal:  Genes Dev       Date:  1993-05       Impact factor: 11.361

7.  Telomere structure in Euplotes crassus: characterization of DNA-protein interactions and isolation of a telomere-binding protein.

Authors:  C M Price
Journal:  Mol Cell Biol       Date:  1990-07       Impact factor: 4.272

8.  Nuclear proteins that bind the pre-mRNA 3' splice site sequence r(UUAG/G) and the human telomeric DNA sequence d(TTAGGG)n.

Authors:  F Ishikawa; M J Matunis; G Dreyfuss; T R Cech
Journal:  Mol Cell Biol       Date:  1993-07       Impact factor: 4.272

9.  A mammalian factor that binds telomeric TTAGGG repeats in vitro.

Authors:  Z Zhong; L Shiue; S Kaplan; T de Lange
Journal:  Mol Cell Biol       Date:  1992-11       Impact factor: 4.272

10.  QUAD, a protein from hepatocyte chromatin that binds selectively to guanine-rich quadruplex DNA.

Authors:  P Weisman-Shomer; M Fry
Journal:  J Biol Chem       Date:  1993-02-15       Impact factor: 5.157

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  9 in total

1.  Identification of two human nuclear proteins that recognise the cytosine-rich strand of human telomeres in vitro.

Authors:  L Lacroix; H Liénard; E Labourier; M Djavaheri-Mergny; J Lacoste; H Leffers; J Tazi; C Hélène; J L Mergny
Journal:  Nucleic Acids Res       Date:  2000-04-01       Impact factor: 16.971

2.  Multiple four-stranded conformations of human telomere sequence d(CCCTAA) in solution.

Authors:  K Kanaori; N Shibayama; K Gohda; K Tajima; K Makino
Journal:  Nucleic Acids Res       Date:  2001-02-01       Impact factor: 16.971

3.  Coexistence of an ILPR i-motif and a partially folded structure with comparable mechanical stability revealed at the single-molecule level.

Authors:  Soma Dhakal; Joseph D Schonhoft; Deepak Koirala; Zhongbo Yu; Soumitra Basu; Hanbin Mao
Journal:  J Am Chem Soc       Date:  2010-07-07       Impact factor: 15.419

4.  G-quadruplex and i-motif are mutually exclusive in ILPR double-stranded DNA.

Authors:  Soma Dhakal; Zhongbo Yu; Ryan Konik; Yunxi Cui; Deepak Koirala; Hanbin Mao
Journal:  Biophys J       Date:  2012-06-05       Impact factor: 4.033

5.  In vitro properties of the conserved mammalian protein hnRNP D suggest a role in telomere maintenance.

Authors:  A Eversole; N Maizels
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

6.  Nontraditional Method for Telomere Staining by PNA Probes.

Authors:  Takamitsu A Kato
Journal:  Methods Mol Biol       Date:  2023

7.  Intramolecular folding in human ILPR fragment with three C-rich repeats.

Authors:  Soma Dhakal; Javonne L Lafontaine; Zhongbo Yu; Deepak Koirala; Hanbin Mao
Journal:  PLoS One       Date:  2012-06-25       Impact factor: 3.240

8.  i-Motif DNA: structural features and significance to cell biology.

Authors:  Hala Abou Assi; Miguel Garavís; Carlos González; Masad J Damha
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

9.  Remodeling the conformational dynamics of I-motif DNA by helicases in ATP-independent mode at acidic environment.

Authors:  Bo Gao; Ya-Ting Zheng; Ai-Min Su; Bo Sun; Xu-Guang Xi; Xi-Miao Hou
Journal:  iScience       Date:  2021-12-06
  9 in total

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