Literature DB >> 8880908

Circularly permuted dihydrofolate reductase possesses all the properties of the molten globule state, but can resume functional tertiary structure by interaction with its ligands.

V N Uversky1, V P Kutyshenko, V V Rogov, K S Vassilenko, A T Gudkov.   

Abstract

It is obvious that functional activity of a protein molecule is closely related to its structure. On the other hand, the understanding of structure-function relationship still remains one of the intriguing problems of molecular biology. There is widespread belief that mutagenesis presents a real way to solve this problem. Following this assumption, we have investigated the effect of circular permutation in dihydrofolate reductase from E. coli on protein structure and functioning. It has been shown that in the absence of ligands two circularly permuted variants of dihydrofolate reductase possess all the properties of the molten globule state. However, after addition of ligands they gain the native-like structural properties and specific activity. This means that the in vitro folding of permuted dihydrofolate reductase is terminated at the stage of the molten globule formation. Interaction of permuted protein with ligands leads to the structural adjustment and formation of active protein molecules.

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Year:  1996        PMID: 8880908      PMCID: PMC2143534          DOI: 10.1002/pro.5560050910

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  30 in total

1.  Folding intermediates are involved in genetic diseases?

Authors:  V E Bychkova; O B Ptitsyn
Journal:  FEBS Lett       Date:  1995-02-06       Impact factor: 4.124

Review 2.  Analytical gel chromatography of proteins.

Authors:  G K Ackers
Journal:  Adv Protein Chem       Date:  1970

3.  Thermodynamics of the denaturation of lysozyme by guanidine hydrochloride. II. Dependence on denaturant concentration at 25 degrees.

Authors:  K C Aune; C Tanford
Journal:  Biochemistry       Date:  1969-11       Impact factor: 3.162

Review 4.  Molten globule and protein folding.

Authors:  O B Ptitsyn
Journal:  Adv Protein Chem       Date:  1995

5.  The molten globule is a third thermodynamical state of protein molecules.

Authors:  O B Ptitsyn; V N Uversky
Journal:  FEBS Lett       Date:  1994-03-14       Impact factor: 4.124

Review 6.  Stability of proteins: small globular proteins.

Authors:  P L Privalov
Journal:  Adv Protein Chem       Date:  1979

7.  Crystal structure of avian dihydrofolate reductase containing phenyltriazine and NADPH.

Authors:  K W Volz; D A Matthews; R A Alden; S T Freer; C Hansch; B T Kaufman; J Kraut
Journal:  J Biol Chem       Date:  1982-03-10       Impact factor: 5.157

8.  Temperature-sensitive mutants blocked in the folding or subunit assembly of the bacteriophage P22 tail spike protein. III. Intensive polypeptide chains synthesized at 39 degrees C.

Authors:  D H Smith; J King
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

9.  Temperature-sensitive mutants blocked in the folding or subunit of the bacteriophage P22 tail spike protein. II. Active mutant proteins matured at 30 degrees C.

Authors:  D P Goldenberg; J King
Journal:  J Mol Biol       Date:  1981-02-05       Impact factor: 5.469

10.  Crystal structures of Escherichia coli and Lactobacillus casei dihydrofolate reductase refined at 1.7 A resolution. II. Environment of bound NADPH and implications for catalysis.

Authors:  D J Filman; J T Bolin; D A Matthews; J Kraut
Journal:  J Biol Chem       Date:  1982-11-25       Impact factor: 5.157

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  22 in total

1.  Production of cyclic peptides and proteins in vivo.

Authors:  C P Scott; E Abel-Santos; M Wall; D C Wahnon; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  1999-11-23       Impact factor: 11.205

2.  Circular permutation of 5-aminolevulinate synthase. Mapping the polypeptide chain to its function.

Authors:  A V Cheltsov; M J Barber; G C Ferreira
Journal:  J Biol Chem       Date:  2001-03-15       Impact factor: 5.157

3.  Random circular permutation leading to chain disruption within and near alpha helices in the catalytic chains of aspartate transcarbamoylase: effects on assembly, stability, and function.

Authors:  P T Beernink; Y R Yang; R Graf; D S King; S S Shah; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

4.  In vivo assembly of aspartate transcarbamoylase from fragmented and circularly permuted catalytic polypeptide chains.

Authors:  X Ni; H K Schachman
Journal:  Protein Sci       Date:  2001-03       Impact factor: 6.725

5.  Increased phospholipase A2 activity with phosphorylation of peroxiredoxin 6 requires a conformational change in the protein.

Authors:  Hamidur Rahaman; Suiping Zhou; Chandra Dodia; Sheldon I Feinstein; Shaohui Huang; David Speicher; Aron B Fisher
Journal:  Biochemistry       Date:  2012-06-29       Impact factor: 3.162

6.  An enzymatic molten globule: efficient coupling of folding and catalysis.

Authors:  Katherina Vamvaca; Beat Vögeli; Peter Kast; Konstantin Pervushin; Donald Hilvert
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-20       Impact factor: 11.205

7.  Reversible thermal denaturation of a 60-kDa genetically engineered beta-sheet polypeptide.

Authors:  Igor K Lednev; Vladimir V Ermolenkov; Seiichiro Higashiya; Ludmila A Popova; Natalya I Topilina; John T Welch
Journal:  Biophys J       Date:  2006-08-04       Impact factor: 4.033

8.  Biological function in a non-native partially folded state of a protein.

Authors:  Francesco Bemporad; Joerg Gsponer; Harri I Hopearuoho; Georgia Plakoutsi; Gianmarco Stati; Massimo Stefani; Niccolò Taddei; Michele Vendruscolo; Fabrizio Chiti
Journal:  EMBO J       Date:  2008-05-01       Impact factor: 11.598

9.  A test of the relationship between sequence and structure in proteins: excision of the heme binding site in apocytochrome b5.

Authors:  A J Constans; M R Mayer; S F Sukits; J T Lecomte
Journal:  Protein Sci       Date:  1998-09       Impact factor: 6.725

10.  Evolution of the folding ability of proteins through functional selection.

Authors:  S Saito; M Sasai; T Yomo
Journal:  Proc Natl Acad Sci U S A       Date:  1997-10-14       Impact factor: 11.205

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