Literature DB >> 8875864

Phylogenetic analysis of Veneridae (Bivalvia): comparison of molecular and palaeontological data.

A Canapa1, I Marota, F Rollo, E Olmo.   

Abstract

An approximately 400-bp-long portion of the 16s rRNA gene sequence has been determined for the venerid clams Chamelea gallina (Chioninae), Dosinia lupinus (Dosiniinae), Pitar rudis, Callista chione (Pitarinae), Tapes decussatus, T. philippinarum, Venerupis (= Paphia) aurea (Tapetinae), and Venus verrucosa (Venerinae). Neighbor-joining and maximum parsimony trees support the results of traditional classification methods at the subfamily level but do not support the concept of a genus Tapes. The transversion divergence rate estimated on the basis of the palaeontological record for the C. gallina/V. verrucosa separation and for the Pitarinae is very close (0.14-0.16% per Myr, respectively) to that of ungulates and cetaceans, while the Tapetinae exhibit a much higher (0.36% per Myr) rate.

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Year:  1996        PMID: 8875864     DOI: 10.1007/bf02337522

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  10 in total

1.  DNA systematics and evolution of the artiodactyl family Bovidae.

Authors:  M W Allard; M M Miyamoto; L Jarecki; F Kraus; M R Tennant
Journal:  Proc Natl Acad Sci U S A       Date:  1992-05-01       Impact factor: 11.205

2.  Thermal habit, metabolic rate and the evolution of mitochondrial DNA.

Authors:  D M Rand
Journal:  Trends Ecol Evol       Date:  1994-04       Impact factor: 17.712

3.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

4.  Revised phylogeny of whales suggested by mitochondrial ribosomal DNA sequences.

Authors:  M C Milinkovitch; G Ortí; A Meyer
Journal:  Nature       Date:  1993-01-28       Impact factor: 49.962

5.  TREECON: a software package for the construction and drawing of evolutionary trees.

Authors:  Y Van de Peer; R De Wachter
Journal:  Comput Appl Biosci       Date:  1993-04

6.  A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences.

Authors:  M Kimura
Journal:  J Mol Evol       Date:  1980-12       Impact factor: 2.395

7.  Interspecific and intrapopulation variation in mitochondrial ribosomal DNA sequences of Mytilus spp. (Bivalvia: Mollusca).

Authors:  J B Geller; J T Carlton; D A Powers
Journal:  Mol Mar Biol Biotechnol       Date:  1993-02

8.  A comparison of molluscan (Bivalvia) phylogenies based on palaeontological and molecular data.

Authors:  E L Rice; D Roddick; R K Singh
Journal:  Mol Mar Biol Biotechnol       Date:  1993-06

9.  Mitochondrial DNA sequences of primates: tempo and mode of evolution.

Authors:  W M Brown; E M Prager; A Wang; A C Wilson
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

10.  Evolution of king crabs from hermit crab ancestors.

Authors:  C W Cunningham; N W Blackstone; L W Buss
Journal:  Nature       Date:  1992-02-06       Impact factor: 49.962

  10 in total
  5 in total

1.  Proteomic identification of novel proteins from the calcifying shell matrix of the Manila clam Venerupis philippinarum.

Authors:  Benjamin Marie; Nolwenn Trinkler; Isabelle Zanella-Cleon; Nathalie Guichard; Michel Becchi; Christine Paillard; Frédéric Marin
Journal:  Mar Biotechnol (NY)       Date:  2011-01-08       Impact factor: 3.619

2.  Cytogenetic characterization and mapping of rDNAs, core histone genes and telomeric sequences in Venerupis aurea and Tapes rhomboides (Bivalvia: Veneridae).

Authors:  Joana Carrilho; Concepción Pérez-García; Alexandra Leitão; Isabel Malheiro; Juan J Pasantes
Journal:  Genetica       Date:  2011-06-14       Impact factor: 1.082

3.  Divergent evolutionary behavior of H3 histone gene and rDNA clusters in venerid clams.

Authors:  Daniel García-Souto; Concepción Pérez-García; Paloma Morán; Juan J Pasantes
Journal:  Mol Cytogenet       Date:  2015-06-24       Impact factor: 2.009

4.  Evolutionary dynamics of rDNA clusters in chromosomes of five clam species belonging to the family Veneridae (Mollusca, Bivalvia).

Authors:  Concepción Pérez-García; Ninoska S Hurtado; Paloma Morán; Juan J Pasantes
Journal:  Biomed Res Int       Date:  2014-05-22       Impact factor: 3.411

5.  Mitochondrial genome sequencing of marine leukaemias reveals cancer contagion between clam species in the Seas of Southern Europe.

Authors:  Daniel Garcia-Souto; Alicia L Bruzos; Seila Diaz; Sara Rocha; Ana Pequeño-Valtierra; Camila F Roman-Lewis; Juana Alonso; Rosana Rodriguez; Damian Costas; Jorge Rodriguez-Castro; Antonio Villanueva; Luis Silva; Jose Maria Valencia; Giovanni Annona; Andrea Tarallo; Fernando Ricardo; Ana Bratoš Cetinić; David Posada; Juan Jose Pasantes; Jose Mc Tubio
Journal:  Elife       Date:  2022-01-18       Impact factor: 8.140

  5 in total

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