Literature DB >> 8868491

Ca(2+)-binding domain VI of rat calpain is a homodimer in solution: hydrodynamic, crystallization and preliminary X-ray diffraction studies.

H Blanchard1, Y Li, M Cygler, C M Kay, J Simon, C Arthur, P L Davies, J S Elce.   

Abstract

The 21-kDa calcium-binding domain (VI) of the small subunit of rat calpain II has been expressed in Escherichia coli, purified, and crystallized. Two orthorhombic crystal forms have been obtained: space group P2(1)2(1)2(1) with a = 50.3, b = 56.5, c = 141.3 A; and space group C222(1) with a = 69.4, b = 73.9, c = 157.4 A. Diffraction data have been collected to 2.4 A. Sedimentation equilibrium, dynamic light scattering, and gel-permeation chromatography indicate that domain VI exists as a homodimer in solution. In accordance with the protein's behavior in solution, each crystal form contains two molecules per asymmetric unit. Screening for heavy-atom derivatives is in progress. To decrease the sensitivity to mercurials and to aid in the search for useful derivatives, Cys-to-Ser mutants have been prepared, expressed, and crystallized.

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Year:  1996        PMID: 8868491      PMCID: PMC2143359          DOI: 10.1002/pro.5560050317

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  11 in total

Review 1.  Calcium-activated neutral protease (calpain) system: structure, function, and regulation.

Authors:  D E Croall; G N DeMartino
Journal:  Physiol Rev       Date:  1991-07       Impact factor: 37.312

2.  The small subunits of calcium dependent proteases with different calcium sensitivities are identical.

Authors:  H Kawasaki; S Imajoh; S Kawashima; H Hayashi; K Suzuki
Journal:  J Biochem       Date:  1986-05       Impact factor: 3.387

3.  Binding of calpain fragments to calpastatin.

Authors:  T Nishimura; D E Goll
Journal:  J Biol Chem       Date:  1991-06-25       Impact factor: 5.157

4.  Carboxyl-terminal truncation and site-directed mutagenesis of the EF hand structure-domain of the small subunit of rabbit calcium-dependent protease.

Authors:  Y Minami; Y Emori; S Imajoh-Ohmi; H Kawasaki; K Suzuki
Journal:  J Biochem       Date:  1988-12       Impact factor: 3.387

Review 5.  Functions of the proteasome: the lysis at the end of the tunnel.

Authors:  A L Goldberg
Journal:  Science       Date:  1995-04-28       Impact factor: 47.728

Review 6.  Evolution of the EF-hand family of proteins.

Authors:  S Nakayama; R H Kretsinger
Journal:  Annu Rev Biophys Biomol Struct       Date:  1994

7.  Distinct kinetics of subunit autolysis in mammalian m-calpain activation.

Authors:  T C Saido; S Nagao; M Shiramine; M Tsukaguchi; T Yoshizawa; H Sorimachi; H Ito; T Tsuchiya; S Kawashima; K Suzuki
Journal:  FEBS Lett       Date:  1994-06-13       Impact factor: 4.124

8.  Studies of the active site of m-calpain and the interaction with calpastatin.

Authors:  C Crawford; N R Brown; A C Willis
Journal:  Biochem J       Date:  1993-11-15       Impact factor: 3.857

9.  Active recombinant rat calpain II. Bacterially produced large and small subunits associate both in vivo and in vitro.

Authors:  K Graham-Siegenthaler; S Gauthier; P L Davies; J S Elce
Journal:  J Biol Chem       Date:  1994-12-02       Impact factor: 5.157

Review 10.  Is calpain activity regulated by membranes and autolysis or by calcium and calpastatin?

Authors:  D E Goll; V F Thompson; R G Taylor; T Zalewska
Journal:  Bioessays       Date:  1992-08       Impact factor: 4.345

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  6 in total

1.  Homodimerization of calpain 3 penta-EF-hand domain.

Authors:  Ravikiran Ravulapalli; Beatriz Garcia Diaz; Robert L Campbell; Peter L Davies
Journal:  Biochem J       Date:  2005-06-01       Impact factor: 3.857

2.  The effects of truncations of the small subunit on m-calpain activity and heterodimer formation.

Authors:  J S Elce; P L Davies; C Hegadorn; D H Maurice; J S Arthur
Journal:  Biochem J       Date:  1997-08-15       Impact factor: 3.857

3.  Roles of individual EF-hands in the activation of m-calpain by calcium.

Authors:  P Dutt; J S Arthur; P Grochulski; M Cygler; J S Elce
Journal:  Biochem J       Date:  2000-05-15       Impact factor: 3.857

4.  Pathogenity of some limb girdle muscular dystrophy mutations can result from reduced anchorage to myofibrils and altered stability of calpain 3.

Authors:  Natalia Ermolova; Elena Kudryashova; Marino DiFranco; Julio Vergara; Irina Kramerova; Melissa J Spencer
Journal:  Hum Mol Genet       Date:  2011-05-30       Impact factor: 6.150

Review 5.  Structure and physiological function of calpains.

Authors:  H Sorimachi; S Ishiura; K Suzuki
Journal:  Biochem J       Date:  1997-12-15       Impact factor: 3.857

Review 6.  A New Insight into the Role of Calpains in Post-mortem Meat Tenderization in Domestic Animals: A review.

Authors:  Ting Lian; Linjie Wang; Yiping Liu
Journal:  Asian-Australas J Anim Sci       Date:  2013-03       Impact factor: 2.509

  6 in total

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