Literature DB >> 8845353

Bicarbonate binding to the non-heme iron of photosystem II investigated by Fourier transform infrared difference spectroscopy and 13C-labeled bicarbonate.

R Hienerwadel1, C Berthomieu.   

Abstract

The binding site of the non-heme iron of photosystem II (PS II) is investigated by light-induced Fourier tranform infrared (FTIR) difference spectroscopy on Tris-washed membranes. The non-heme iron is oxidized (Fe3+) in the dark with ferricyanide and reduced (Fe2+) after light-induced charge separation by electron transfer from the semiquinone anion QA-. EPR experiments and IR modes of ferri- and ferrocyanide show that the electron donor side of PS II is reduced in less than 2 s after a flash and that ferricyanide reoxidizes the non-heme iron with a half-time of approximately 20 s. Recording FTIR spectra before and 2 s after flash illumination thus results in the Fe2+/Fe3+ difference spectrum. This spectrum shows band shifts and intensity changes of IR modes from ligands and neighboring residues of the non-heme iron. The IR modes of bicarbonate are revealed by comparison of Fe2+/Fe3+ spectra obtained on PS II membranes with 12C or 13C isotope labeled bicarbonate in H2O and in 2H2O. The nu as(CO) and nu s(CO) modes of bicarbonate in the Fe2+ state are assigned at 1530 +/- 10 and 1338 cm-1, respectively. The low frequency of the nu as(CO) mode is taken as experimental evidence that bicarbonate is a ligand of the non-heme iron. Furthermore, the small frequency difference (192 cm-1) between the nu as(CO) and nu s(CO) modes as compared to even hydrogen-bonded ionic bicarbonate strongly indicates that bicarbonate is a bidentate ligand of the non-heme iron in PS II. Upon iron oxidation, the bicarbonate modes are largely affected. The nu s(CO) mode is assigned at 1228 cm-1, while the nu as(CO) mode is tentatively assigned at 1658 +/- 20 cm-1. The strong up- and downshifts of the nu as and nu s(CO) modes of bicarbonate upon iron oxidation results in a frequency difference of 430 +/- 20 cm-1 that is not only explained by the increased charge on the iron but indicates that bicarbonate is a monodentate ligand of the oxidized iron. The sensitivity of the nu s(CO) mode of bicarbonate to 1H/2H exchange in both the Fe2+ and Fe3+ states and the presence in the Fe2+ state of a delta (COH) mode at 1258 cm-1 confirm that bicarbonate and not carbonate is the iron ligand and further exhibits hydrogen bond(s) with the protein. The 13C isotope-sensitive modes of bicarbonate are not affected by 15N labeling of the PS II membranes. 15N sensitive signals at 1111/1102 and 1094 cm-1 are assigned to side chain modes from histidine ligands of the iron. The latter signal is proposed to account for a histidine ligand that deprotonates upon iron oxidation. The involvement of protein peptide groups and side chains in the hydrogen-bond network around the iron is also discussed.

Entities:  

Mesh:

Substances:

Year:  1995        PMID: 8845353     DOI: 10.1021/bi00050a008

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  ;Low-waves' in chlorophyll fluorescence kinetics indicate deprivation of bicarbonate.

Authors:  Marco Xyländer; Christoph Hagen
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

Review 2.  Light-induced FTIR difference spectroscopy as a powerful tool toward understanding the molecular mechanism of photosynthetic oxygen evolution.

Authors:  Takumi Noguchi
Journal:  Photosynth Res       Date:  2007-02-06       Impact factor: 3.573

Review 3.  Photosystem II: structure and mechanism of the water:plastoquinone oxidoreductase.

Authors:  Jan Kern; Gernot Renger
Journal:  Photosynth Res       Date:  2007-07-17       Impact factor: 3.573

4.  Glycolate Induces Redox Tuning Of Photosystem II in Vivo: Study of a Photorespiration Mutant.

Authors:  Marine Messant; Stefan Timm; Andrea Fantuzzi; Wolfram Weckwerth; Hermann Bauwe; A William Rutherford; Anja Krieger-Liszkay
Journal:  Plant Physiol       Date:  2018-05-23       Impact factor: 8.340

Review 5.  Fourier transform infrared (FTIR) spectroscopy.

Authors:  Catherine Berthomieu; Rainer Hienerwadel
Journal:  Photosynth Res       Date:  2009-06-10       Impact factor: 3.573

6.  Modeling of the D1/D2 proteins and cofactors of the photosystem II reaction center: implications for herbicide and bicarbonate binding.

Authors:  J Xiong; S Subramaniam
Journal:  Protein Sci       Date:  1996-10       Impact factor: 6.725

7.  Mechanism of proton-coupled quinone reduction in Photosystem II.

Authors:  Keisuke Saito; A William Rutherford; Hiroshi Ishikita
Journal:  Proc Natl Acad Sci U S A       Date:  2012-12-31       Impact factor: 11.205

8.  Redox infrared markers of the heme and axial ligands in microperoxidase: Bases for the analysis of c-type cytochromes.

Authors:  Laure Marboutin; Alain Boussac; Catherine Berthomieu
Journal:  J Biol Inorg Chem       Date:  2006-06-17       Impact factor: 3.358

9.  Interactions of chloride and formate at the donor and the acceptor side of photosystem II.

Authors:  Anjana Jajoo; Sudhakar Bharti; Asako Kawamori
Journal:  J Bioenerg Biomembr       Date:  2005-02       Impact factor: 2.945

10.  Role of bicarbonate at the acceptor side of Photosystem II.

Authors:  Jack J S van Rensen
Journal:  Photosynth Res       Date:  2002       Impact factor: 3.573

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.