Literature DB >> 8844667

Current status of the Plasmodium falciparum genome project.

J B Dame1, D E Arnot, P F Bourke, D Chakrabarti, Z Christodoulou, R L Coppel, A F Cowman, A G Craig, K Fischer, J Foster, N Goodman, K Hinterberg, A A Holder, D C Holt, D J Kemp, M Lanzer, A Lim, C I Newbold, J V Ravetch, G R Reddy, J Rubio, S M Schuster, X Z Su, J K Thompson, E B Werner.   

Abstract

The Plasmodium falciparum Genome Project is a collaborative effort by many laboratories that will provide detailed molecular information about the parasite, which may be used for developing practical control measures. Initial goals are to prepare an electronically indexed clone bank containing partially sequenced clones representing up to 80% of the parasite's genes and to prepare an ordered set of overlapping clones spanning each of the parasite's 14 chromosomes. Currently, clones of genomic DNA, prepared as yeast artificial chromosomes, are arranged into contigs covering approximately 70% of the genome of parasite clone 3D7, gene sequence tags are available from more than contigs covering approximately 70% of the genome of parasite clone 3D7, gene sequence tags are available from more than 20% of the parasite's genes, and approximately 5% of the parasite's genes are tentatively identified from similarity searches of entries in the international sequence databases. A total of > 0.5 Mb of P. falciparum sequence tag data is available. The gene sequence tags are presently being used to complete YAC contig assembly and localize the cloned genes to positions on the physical map in preparation for sequencing the genome. Routes of access to project information and services are described.

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Year:  1996        PMID: 8844667     DOI: 10.1016/0166-6851(96)02641-2

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN: 0166-6851            Impact factor:   1.759


  10 in total

1.  Optical mapping of Plasmodium falciparum chromosome 2.

Authors:  J Jing; Z Lai; C Aston; J Lin; D J Carucci; M J Gardner; B Mishra; T S Anantharaman; H Tettelin; L M Cummings; S L Hoffman; J C Venter; D C Schwartz
Journal:  Genome Res       Date:  1999-02       Impact factor: 9.043

Review 2.  Molecular aspects of severe malaria.

Authors:  Q Chen; M Schlichtherle; M Wahlgren
Journal:  Clin Microbiol Rev       Date:  2000-07       Impact factor: 26.132

3.  A random survey of the Cryptosporidium parvum genome.

Authors:  C Liu; V Vigdorovich; V Kapur; M S Abrahamsen
Journal:  Infect Immun       Date:  1999-08       Impact factor: 3.441

4.  A set of independent selectable markers for transfection of the human malaria parasite Plasmodium falciparum.

Authors:  C B Mamoun; I Y Gluzman; S Goyard; S M Beverley; D E Goldberg
Journal:  Proc Natl Acad Sci U S A       Date:  1999-07-20       Impact factor: 11.205

5.  Distinct frequency-distributions of homopolymeric DNA tracts in different genomes.

Authors:  K J Dechering; K Cuelenaere; R N Konings; J A Leunissen
Journal:  Nucleic Acids Res       Date:  1998-09-01       Impact factor: 16.971

6.  High recombination rate in natural populations of Plasmodium falciparum.

Authors:  D J Conway; C Roper; A M Oduola; D E Arnot; P G Kremsner; M P Grobusch; C F Curtis; B M Greenwood
Journal:  Proc Natl Acad Sci U S A       Date:  1999-04-13       Impact factor: 11.205

7.  Carotenoid biosynthesis in intraerythrocytic stages of Plasmodium falciparum.

Authors:  Renata Tonhosolo; Fabio L D'Alexandri; Veridiana V de Rosso; Marcos L Gazarini; Miriam Y Matsumura; Valnice J Peres; Emilio F Merino; Jane M Carlton; Gerhard Wunderlich; Adriana Z Mercadante; Emília A Kimura; Alejandro M Katzin
Journal:  J Biol Chem       Date:  2009-02-09       Impact factor: 5.157

8.  Gene amplification in Leishmania tarentolae selected for resistance to sodium stibogluconate.

Authors:  A Haimeur; M Ouellette
Journal:  Antimicrob Agents Chemother       Date:  1998-07       Impact factor: 5.191

9.  Plasmodium falciparum phospholipase C hydrolyzing sphingomyelin and lysocholinephospholipids is a possible target for malaria chemotherapy.

Authors:  Kentaro Hanada; Nirianne Marie Q Palacpac; Pamela A Magistrado; Ken Kurokawa; Ganesh Rai; Daiji Sakata; Tomoko Hara; Toshihiro Horii; Masahiro Nishijima; Toshihide Mitamura
Journal:  J Exp Med       Date:  2002-01-07       Impact factor: 14.307

Review 10.  Advances and opportunities in malaria population genomics.

Authors:  Daniel E Neafsey; Aimee R Taylor; Bronwyn L MacInnis
Journal:  Nat Rev Genet       Date:  2021-04-08       Impact factor: 59.581

  10 in total

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