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Literature DB >> 8836436

DNA in soil: adsorption, genetic transformation, molecular evolution and genetic microchip.

Abstract

This review examines interactions between DNA and soil with an emphasis on the persistence and stability of DNA in soil. The role of DNA in genetic transformation in soil microorganisms will also be discussed. In addition, a postulated mechanism for stabilization and elongation/assembly of primitive genetic material and the role of soil particles, salt concentrations, temperature cycling and crystal formation is examined.

Entities: Chemical

Mesh：

Substances：
Soil
RNA
DNA

Year: 1996 PMID： 8836436 DOI： 10.1007/bf00393564

Source DB: PubMed Journal: Antonie Van Leeuwenhoek ISSN： 0003-6072 Impact factor: 2.271

26 in total

1. Direct recovery and molecular analysis of DNA and RNA from soil.

Authors: S Selenska; W Klingmüller
Journal: Microb Releases Date: 1992-06

2. DNA Probe Method for the Detection of Specific Microorganisms in the Soil Bacterial Community.

Authors: William E Holben; Janet K Jansson; Barry K Chelm; James M Tiedje
Journal: Appl Environ Microbiol Date: 1988-03 Impact factor: 4.792

3. Adsorption of plasmid DNA to mineral surfaces and protection against DNase I.

Authors: G Romanowski; M G Lorenz; W Wackernagel
Journal: Appl Environ Microbiol Date: 1991-04 Impact factor: 4.792

Review 4. Bacterial evolution.

Authors: C R Woese
Journal: Microbiol Rev Date: 1987-06

Review 5. Nucleic acids in the environment.

Authors: J T Trevors
Journal: Curr Opin Biotechnol Date: 1996-06 Impact factor: 9.740

Review 6. Use of microcosms to study genetic interactions between microorganisms.

Authors: J T Trevors
Journal: Microbiol Sci Date: 1988-05

Review 7. Survival of, and genetic transfer by, genetically engineered bacteria in natural environments.

Authors: G Stotzky; H Babich
Journal: Adv Appl Microbiol Date: 1986 Impact factor: 5.086

8. Highly efficient genetic transformation of Bacillus subtilis attached to sand grains.

Authors: M G Lorenz; B W Aardema; W Wackernagel
Journal: J Gen Microbiol Date: 1988-01

9. Adsorption of DNA to sand and variable degradation rates of adsorbed DNA.

Authors: M G Lorenz; W Wackernagel
Journal: Appl Environ Microbiol Date: 1987-12 Impact factor: 4.792

10. Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide.

Authors: P E Nielsen; M Egholm; R H Berg; O Buchardt
Journal: Science Date: 1991-12-06 Impact factor: 47.728

15 in total

1. Terminal restriction fragment length polymorphism monitoring of genes amplified directly from bacterial communities in soils and sediments.

Authors: K D Bruce; M R Hughes
Journal: Mol Biotechnol Date: 2000-11 Impact factor: 2.695

2. Evolution of cell division in bacteria.

Authors: J T Trevors
Journal: Theory Biosci Date: 2004-06 Impact factor: 1.919

3. PCR-DGGE comparison of bacterial community structure in fresh and archived soils sampled along a Chihuahuan Desert elevational gradient.

Authors: James H Campbell; Jeb S Clark; John C Zak
Journal: Microb Ecol Date: 2008-12-24 Impact factor: 4.552

DNA in soil: adsorption, genetic transformation, molecular evolution and genetic microchip.

1. Direct recovery and molecular analysis of DNA and RNA from soil.

2. DNA Probe Method for the Detection of Specific Microorganisms in the Soil Bacterial Community.

3. Adsorption of plasmid DNA to mineral surfaces and protection against DNase I.

Review 4. Bacterial evolution.

Review 5. Nucleic acids in the environment.

Review 6. Use of microcosms to study genetic interactions between microorganisms.

Review 7. Survival of, and genetic transfer by, genetically engineered bacteria in natural environments.

8. Highly efficient genetic transformation of Bacillus subtilis attached to sand grains.

9. Adsorption of DNA to sand and variable degradation rates of adsorbed DNA.

10. Sequence-selective recognition of DNA by strand displacement with a thymine-substituted polyamide.

1. Terminal restriction fragment length polymorphism monitoring of genes amplified directly from bacterial communities in soils and sediments.

2. Evolution of cell division in bacteria.

3. PCR-DGGE comparison of bacterial community structure in fresh and archived soils sampled along a Chihuahuan Desert elevational gradient.

4. Effect of DNase and antibiotics on biofilm characteristics.

5. Cryptic microbial communities in Antarctic deserts.

6. Nucleic Acid Extraction from Synthetic Mars Analog Soils for in situ Life Detection.

7. Tuber aestivum Vittad. mycelium quantified: advantages and limitations of a qPCR approach.

8. Natural transformation of Pseudomonas fluorescens and Agrobacterium tumefaciens in soil.

9. Vertical transmission of biosynthetic plasmids in aphid endosymbionts (Buchnera).

10. Rational design of a plasmid origin that replicates efficiently in both gram-positive and gram-negative bacteria.