Literature DB >> 8812431

The d4 gene family in the human genome.

A V Chestkov1, I D Baka, M V Kost, G P Georgiev, V L Buchman.   

Abstract

The d4 domain, a novel zinc finger-like structural motif, was first revealed in the rat neuro-d4 protein. Here we demonstrate that the d4 domain is conserved in evolution and that three related genes form a d4 family in the human genome. The human neuro-d4 is very similar to rat neuro-d4 at both the amino acid and the nucleotide levels. Moreover, the same splice variants have been detected among rat and human neuro-d4 transcripts. This gene has been localized on chromosome 19, and two other genes, members of the d4 family isolated by screening of the human genomic library at low stringency, have been mapped to chromosomes 11 and 14. The gene on chromosome 11 is the homolog of the ubiquitously expressed mouse gene ubi-d4/requiem, which is required for cell death after deprivation of trophic factors. A gene with a conserved d4 domain has been found in the genome of the nematode Caenorhabditis elegans. The conservation of d4 proteins from nematodes to vertebrates suggests that they have a general importance, but a diversity of d4 proteins expressed in vertebrate nervous systems suggests that some family members have special functions.

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Year:  1996        PMID: 8812431     DOI: 10.1006/geno.1996.0440

Source DB:  PubMed          Journal:  Genomics        ISSN: 0888-7543            Impact factor:   5.736


  8 in total

1.  Mutations in the BAF-Complex Subunit DPF2 Are Associated with Coffin-Siris Syndrome.

Authors:  Georgia Vasileiou; Silvia Vergarajauregui; Sabine Endele; Bernt Popp; Christian Büttner; Arif B Ekici; Marion Gerard; Nuria C Bramswig; Beate Albrecht; Jill Clayton-Smith; Jenny Morton; Susan Tomkins; Karen Low; Astrid Weber; Maren Wenzel; Janine Altmüller; Yun Li; Bernd Wollnik; George Hoganson; Maria-Renée Plona; Megan T Cho; Christian T Thiel; Hermann-Josef Lüdecke; Tim M Strom; Eduardo Calpena; Andrew O M Wilkie; Dagmar Wieczorek; Felix B Engel; André Reis
Journal:  Am J Hum Genet       Date:  2018-02-08       Impact factor: 11.025

2.  Histone-binding of DPF2 mediates its repressive role in myeloid differentiation.

Authors:  Ferdinand M Huber; Sarah M Greenblatt; Andrew M Davenport; Concepcion Martinez; Ye Xu; Ly P Vu; Stephen D Nimer; André Hoelz
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-22       Impact factor: 11.205

3.  Requiem protein links RelB/p52 and the Brm-type SWI/SNF complex in a noncanonical NF-kappaB pathway.

Authors:  Toshio Tando; Aya Ishizaka; Hirotaka Watanabe; Taiji Ito; Shun Iida; Takeshi Haraguchi; Taketoshi Mizutani; Tomonori Izumi; Toshiaki Isobe; Taishin Akiyama; Jun-ichiro Inoue; Hideo Iba
Journal:  J Biol Chem       Date:  2010-05-11       Impact factor: 5.157

4.  Double plant homeodomain (PHD) finger proteins DPF3a and -3b are required as transcriptional co-activators in SWI/SNF complex-dependent activation of NF-κB RelA/p50 heterodimer.

Authors:  Aya Ishizaka; Taketoshi Mizutani; Kazuyoshi Kobayashi; Toshio Tando; Kouhei Sakurai; Toshinobu Fujiwara; Hideo Iba
Journal:  J Biol Chem       Date:  2012-02-13       Impact factor: 5.157

5.  SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes.

Authors:  Evelien Middeljans; Xi Wan; Pascal W Jansen; Vikram Sharma; Hendrik G Stunnenberg; Colin Logie
Journal:  PLoS One       Date:  2012-03-19       Impact factor: 3.240

6.  Generation of mutant mice with targeted disruption of two members of the d4 gene family: neuro-d4 and cer-d4.

Authors:  I B Mertsalov; N N Ninkina; J S Wanless; V L Buchman; L I Korochkin; D A Kulikova
Journal:  Dokl Biochem Biophys       Date:  2008 Mar-Apr       Impact factor: 0.834

7.  Staufen1-mediated mRNA decay induces Requiem mRNA decay through binding of Staufen1 to the Requiem 3'UTR.

Authors:  Min Young Kim; Jungyun Park; Jong Joo Lee; Dae Hyun Ha; Jonghwan Kim; Chan Gil Kim; Jungwook Hwang; Chul Geun Kim
Journal:  Nucleic Acids Res       Date:  2014-05-05       Impact factor: 16.971

8.  BAF45b Is Required for Efficient Zika Virus Infection of HAP1 Cells.

Authors:  B David Persson; Stefan Nord; Richard Lindqvist; Katarina Danskog; Anna K Överby; Alain Kohl; Hugh J Willison; Annasara Lenman; Niklas Arnberg
Journal:  Viruses       Date:  2021-10-06       Impact factor: 5.048

  8 in total

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