Literature DB >> 8784192

Conformational stability of the Escherichia coli HPr protein: test of the linear extrapolation method and a thermodynamic characterization of cold denaturation.

E M Nicholson1, J M Scholtz.   

Abstract

The conformational stability of the histidine-containing phosphocarrier protein (HPr) from Escherichia coli has been determined using a combination of thermal unfolding and urea denaturation experiments. The analysis of the denaturation data provides a measure of the changes in conformational free energy, enthalpy, entropy, and heat capacity that accompany the equilibrium folding of HPr over a wide range of temperature and urea concentrations. In moderate concentrations of urea, HPr undergoes both high- and low-temperature unfolding, allowing for a reliable determination of the change in heat capacity for the conformational transition. The data are consistent with the linear free energy relationship commonly employed to analyze protein denaturation data, even over a relatively large temperature and urea concentration range. Furthermore, we find that a temperature-independent delta Cp is adequate to describe HPr stability over the accessible temperature range. Finally, our data allow us to evaluate the energetics of the urea-protein interaction. For HPr, the changes in excess enthalpy and entropy of the denaturant-protein interaction(s) make only minor contributions to the observed delta H and delta S terms, presumably due in some part to the small size of the HPr protein.

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Year:  1996        PMID: 8784192     DOI: 10.1021/bi960863y

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  28 in total

1.  Heat capacity change for ribonuclease A folding.

Authors:  C N Pace; G R Grimsley; S T Thomas; G I Makhatadze
Journal:  Protein Sci       Date:  1999-07       Impact factor: 6.725

2.  Ultrafast folding of WW domains without structured aromatic clusters in the denatured state.

Authors:  N Ferguson; C M Johnson; M Macias; H Oschkinat; A Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-30       Impact factor: 11.205

3.  Using flexible loop mimetics to extend phi-value analysis to secondary structure interactions.

Authors:  N Ferguson; J R Pires; F Toepert; C M Johnson; Y P Pan; R Volkmer-Engert; J Schneider-Mergener; V Daggett; H Oschkinat; A Fersht
Journal:  Proc Natl Acad Sci U S A       Date:  2001-10-30       Impact factor: 11.205

4.  Conformational stability and thermodynamic characterization of the lipoic acid bearing domain of human mitochondrial branched chain alpha-ketoacid dehydrogenase.

Authors:  Mandar T Naik; Tai-Huang Huang
Journal:  Protein Sci       Date:  2004-09       Impact factor: 6.725

5.  Unfolding studies on soybean agglutinin and concanavalin a tetramers: a comparative account.

Authors:  Sharmistha Sinha; Nivedita Mitra; Gyanendra Kumar; Kanika Bajaj; Avadhesha Surolia
Journal:  Biophys J       Date:  2004-11-12       Impact factor: 4.033

6.  Spectroscopic and differential scanning calorimetric studies on the unfolding of Trichosanthes dioica seed lectin. Similar modes of thermal and chemical denaturation.

Authors:  M Kavitha; Musti J Swamy
Journal:  Glycoconj J       Date:  2009-11       Impact factor: 2.916

7.  Thermodynamics, kinetics, and salt dependence of folding of YopM, a large leucine-rich repeat protein.

Authors:  Ellen Kloss; Doug Barrick
Journal:  J Mol Biol       Date:  2008-09-04       Impact factor: 5.469

8.  Denaturant mediated unfolding of both native and molten globule states of maltose binding protein are accompanied by large deltaCp's.

Authors:  S Sheshadri; G M Lingaraju; R Varadarajan
Journal:  Protein Sci       Date:  1999-08       Impact factor: 6.725

9.  Global analysis of the thermal and chemical denaturation of the N-terminal domain of the ribosomal protein L9 in H2O and D2O. Determination of the thermodynamic parameters, deltaH(o), deltaS(o), and deltaC(o)p and evaluation of solvent isotope effects.

Authors:  B Kuhlman; D P Raleigh
Journal:  Protein Sci       Date:  1998-11       Impact factor: 6.725

10.  Engineering a two-helix bundle protein for folding studies.

Authors:  Charlotte A Dodson; Neil Ferguson; Trevor J Rutherford; Christopher M Johnson; Alan R Fersht
Journal:  Protein Eng Des Sel       Date:  2010-02-03       Impact factor: 1.650

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