Literature DB >> 8687388

Triplex DNA in the nucleus: direct binding of triplex-specific antibodies and their effect on transcription, replication and cell growth.

Y M Agazie1, G D Burkholder, J S Lee.   

Abstract

Jel 318 and Jel 466 are triplex-specific monoclonal antibodies which previously have been shown to bind to cell nuclei and chromosomes by immunofluorescence. Their interaction was further characterized by two methods. First, isolated intact nuclei were encapsulated in agarose. Both antibodies showed significant binding to the nuclei which could be inhibited by adding competing triplex DNA but not by adding Escherichia coli DNA to which the antibodies do not bind. Both triplex-specific antibodies inhibited replication and transcription in the nuclei by about 20%. Secondly, the antibodies were introduced into synchronized myeloma cells by osmotic shock of pynocytic vesicles. Cell-cycle studies showed that the myeloma cells had an S phase of about 10 h and a doubling time of about 20 h. The cells were synchronized with thymidine and both cell growth and cell death were monitored. Introduction of the triplex-specific antibodies caused a marked decrease in cell growth without a significant increase in cell death. The effectiveness of the antibodies was improved by the addition of chloroquine diphosphate which inhibits degradation in the lysosomes. As a control, introduction of an antibody specific for a bacterial protein had little effect. In synchronized cells, inhibition of proliferation reached a maximum at 7 to 13 h after the release from the thymidine block. Thus, cells are most sensitive to the triplex-binding antibodies at the end of S phase and during G2. This result is consistent with the view that triplexes are involved in chromosome condensation/decondensation.

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Year:  1996        PMID: 8687388      PMCID: PMC1217372          DOI: 10.1042/bj3160461

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  41 in total

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2.  Incorporation of monoclonal antibodies into cells by osmotic permeabilization. Effect on cellular metabolism.

Authors:  R Chakrabarti; N E Pfeiffer; D E Wylie; S M Schuster
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3.  Abundance and degree of dispersion of genomic d(GA)n.d(TC)n sequences.

Authors:  H Manor; B S Rao; R G Martin
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4.  Immunofluorescent staining of mammalian nuclei and chromosomes with a monoclonal antibody to triplex DNA.

Authors:  G D Burkholder; L J Latimer; J S Lee
Journal:  Chromosoma       Date:  1988-11       Impact factor: 4.316

Review 5.  The chemistry and biology of unusual DNA structures adopted by oligopurine.oligopyrimidine sequences.

Authors:  R D Wells; D A Collier; J C Hanvey; M Shimizu; F Wohlrab
Journal:  FASEB J       Date:  1988-11       Impact factor: 5.191

6.  Effect of length, supercoiling, and pH on intramolecular triplex formation. Multiple conformers at pur.pyr mirror repeats.

Authors:  D A Collier; R D Wells
Journal:  J Biol Chem       Date:  1990-06-25       Impact factor: 5.157

7.  Magnesium ion-dependent triple-helix structure formed by homopurine-homopyrimidine sequences in supercoiled plasmid DNA.

Authors:  Y Kohwi; T Kohwi-Shigematsu
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

Review 8.  Topology and formation of triple-stranded H-DNA.

Authors:  H Htun; J E Dahlberg
Journal:  Science       Date:  1989-03-24       Impact factor: 47.728

9.  A gentle method for preparing cyto- and nucleo-skeletons and associated chromatin.

Authors:  D A Jackson; J Yuan; P R Cook
Journal:  J Cell Sci       Date:  1988-07       Impact factor: 5.285

10.  The level of Z-DNA in metabolically active, permeabilized mammalian cell nuclei is regulated by torsional strain.

Authors:  B Wittig; T Dorbic; A Rich
Journal:  J Cell Biol       Date:  1989-03       Impact factor: 10.539

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  23 in total

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2.  Unique condensation patterns of triplex DNA: physical aspects and physiological implications.

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Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

Review 3.  Non-B DNA structure-induced genetic instability and evolution.

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Review 4.  Potential in vivo roles of nucleic acid triple-helices.

Authors:  Fabian A Buske; John S Mattick; Timothy L Bailey
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Review 5.  Molecular analyses of DNA helicases involved in the replicational stress response.

Authors:  Yuliang Wu; Joshua A Sommers; Avvaru N Suhasini; Monika Aggarwal; Robert M Brosh
Journal:  Methods       Date:  2010-02-25       Impact factor: 3.608

6.  The yeast CDP1 gene encodes a triple-helical DNA-binding protein.

Authors:  M Musso; G Bianchi-Scarrà; M W Van Dyke
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7.  The capacity to form H-DNA cannot substitute for GAGA factor binding to a (CT)n*(GA)n regulatory site.

Authors:  Quinn Lu; John M Teare; Howard Granok; Marci J Swede; Jenny Xu; Sarah C R Elgin
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8.  Human initiation protein Orc4 prefers triple stranded DNA.

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9.  Potential sites of triple-helical nucleic acid formation in chromosomes of Rhynchosciara (Diptera: Sciaridae) and Drosophila melanogaster.

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Journal:  Chromosome Res       Date:  2009       Impact factor: 5.239

10.  Naturally occurring H-DNA-forming sequences are mutagenic in mammalian cells.

Authors:  Guliang Wang; Karen M Vasquez
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-01       Impact factor: 11.205

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