Literature DB >> 8679591

Conformational constraints on the headgroup and sn-2 chain of bilayer DMPC from NMR dipolar couplings.

M Hong1, K Schmidt-Rohr, H Zimmermann.   

Abstract

This paper presents new NMR constraints on the conformation of the headgroup, glycerol backbone, and sn-2 chain of 1,2-dimyristoyl-sn-glycero-3-phosphatidylcholine (DMPC) in the liquid-crystalline bilayer. Using two-dimensional 13C-1H chemical shift correlation spectroscopy, we find significant dipolar couplings between the carboxyl carbon CO2 and the headgroup protons. This indicates that a conformation in which the DMPC headgroup and the beginning of the sn-2 chain bend toward each other is significantly populated in the fluid bilayer. The predominance of this headgroup orientation can be further confirmed by 31P-13C dipolar couplings from the literature, which constrain the glycerol G2-G3 torsion angle to be close to trans, excluding a significant presence of one of the two conformations found in the DMPC crystal. Combining and reexamining 20 known NMR couplings for the glycerol backbone and its adjacent segments of L alpha-DMPC, we find that several torsion angles and bond orientations in the core of the DMPC molecule are constrained severely and must differ from those in the crystal structure. We propose a consistent molecular model for phosphocholine lipids in the liquid-crystalline phase, with a rigid backbone in the core of the molecule, a bent-back headgroup, and increasing mobility toward the ends of the acyl chains and the headgroup.

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Year:  1996        PMID: 8679591     DOI: 10.1021/bi953083i

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  15 in total

1.  A new approach for applying residual dipolar couplings as restraints in structure elucidation.

Authors:  J Meiler; N Blomberg; M Nilges; C Griesinger
Journal:  J Biomol NMR       Date:  2000-03       Impact factor: 2.835

2.  Orientation and conformation of lipids in crystals of transmembrane proteins.

Authors:  Derek Marsh; Tibor Páli
Journal:  Eur Biophys J       Date:  2012-05-30       Impact factor: 1.733

3.  Proton-evolved local-field solid-state NMR studies of cytochrome b5 embedded in bicelles, revealing both structural and dynamical information.

Authors:  Ronald Soong; Pieter E S Smith; Jiadi Xu; Kazutoshi Yamamoto; Sang-Choul Im; Lucy Waskell; Ayyalusamy Ramamoorthy
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

4.  Phospholipid bilayer surface configuration probed quantitatively by (31)P field-cycling NMR.

Authors:  Mary F Roberts; Alfred G Redfield
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-29       Impact factor: 11.205

5.  Cholesterol-Induced Conformational Change in the Sphingomyelin Headgroup.

Authors:  Shinya Hanashima; Kazuhiro Murakami; Michihiro Yura; Yo Yano; Yuichi Umegawa; Hiroshi Tsuchikawa; Nobuaki Matsumori; Sangjae Seo; Wataru Shinoda; Michio Murata
Journal:  Biophys J       Date:  2019-06-25       Impact factor: 4.033

6.  Dynamical properties of a hydrated lipid bilayer from a multinanosecond molecular dynamics simulation.

Authors:  P B Moore; C F Lopez; M L Klein
Journal:  Biophys J       Date:  2001-11       Impact factor: 4.033

7.  A carbon-13 nuclear magnetic resonance spectroscopic study of inter-proton pair order parameters: a new approach to study order and dynamics in phospholipid membrane systems.

Authors:  J A Urbina; B Moreno; W Arnold; C H Taron; P Orlean; E Oldfield
Journal:  Biophys J       Date:  1998-09       Impact factor: 4.033

8.  Interleaflet mixing and coupling in liquid-disordered phospholipid bilayers.

Authors:  Sara Capponi; J Alfredo Freites; Douglas J Tobias; Stephen H White
Journal:  Biochim Biophys Acta       Date:  2015-11-30

Review 9.  When detergent meets bilayer: birth and coming of age of lipid bicelles.

Authors:  Ulrich H N Dürr; Ronald Soong; Ayyalusamy Ramamoorthy
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-01-23       Impact factor: 9.795

10.  Lipid Configurations from Molecular Dynamics Simulations.

Authors:  Weria Pezeshkian; Himanshu Khandelia; Derek Marsh
Journal:  Biophys J       Date:  2018-04-24       Impact factor: 4.033

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