Literature DB >> 8670821

The xanthopsins: a new family of eubacterial blue-light photoreceptors.

R Kort1, W D Hoff, M Van West, A R Kroon, S M Hoffer, K H Vlieg, W Crielaand, J J Van Beeumen, K J Hellingwerf.   

Abstract

Photoactive yellow protein (PYP) is a photoreceptor that has been isolated from three halophilic phototrophic purple bacteria. The PYP from Ectothiorhodospira halophila BN9626 is the only member for which the sequence has been reported at the DNA level. Here we describe the cloning and sequencing of the genes encoding the PYPs from E.halophila SL-1 (type strain) and Rhodospirillum salexigens. The latter protein contains, like the E.halophila PYP, the chromophore trans p-coumaric acid, as we show here with high performance capillary zone electrophoresis. Additionally, we present evidence for the presence of a gene encoding a PYP homolog in Rhodobacter sphaeroides, the first genetically well-characterized bacterium in which this photoreceptor has been identified. An ORF downstream of the pyp gene from E.halophila encodes an enzyme, which is proposed to be involved in the biosynthesis of the chromophore of PYP. The pyp gene from E.halophila was used for heterologous overexpression in both Escherichia coli and R.sphaeroides, aimed at the development of a holoPYP overexpression system (an intact PYP, containing the p-coumaric acid chromophore and displaying the 446 nm absorbance band). In both organisms the protein could be detected immunologically, but its yellow color was not observed. Molecular genetic construction of a histidine-tagged version of PYP led to its 2500-fold overproduction in E.coli and simplified purification of the heterologously produced apoprotein. HoloPYP could be reconstituted by the addition of p-coumaric anhydride to the histidine-tagged apoPYP (PYP lacking its chromophore). We propose to call the family of photoactive yellow proteins the xanthopsins, in analogy with the rhodopsins.

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Year:  1996        PMID: 8670821      PMCID: PMC451869     

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  39 in total

1.  Nucleotide sequence of rice 4-coumarate:CoA ligase gene, 4-CL.1.

Authors:  Y Zhao; S D Kung; S K Dube
Journal:  Nucleic Acids Res       Date:  1990-10-25       Impact factor: 16.971

2.  Reduction of background problems in nonradioactive northern and Southern blot analyses enables higher sensitivity than 32P-based hybridizations.

Authors:  G Engler-Blum; M Meier; J Frank; G A Müller
Journal:  Anal Biochem       Date:  1993-05-01       Impact factor: 3.365

3.  ctothiorhodospira halophila: a new species ofthe genus Ectothiorhodospira.

Authors:  J C Raymond; W R Sistrom
Journal:  Arch Mikrobiol       Date:  1969

4.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

5.  Unidirectional, intermittent rotation of the flagellum of Rhodobacter sphaeroides.

Authors:  J P Armitage; R M Macnab
Journal:  J Bacteriol       Date:  1987-02       Impact factor: 3.490

6.  Cloning, sequence analysis, and functional expression of the acetyl coenzyme A synthetase gene from Methanothrix soehngenii in Escherichia coli.

Authors:  R I Eggen; A C Geerling; A B Boshoven; W M de Vos
Journal:  J Bacteriol       Date:  1991-10       Impact factor: 3.490

7.  Measurement and global analysis of the absorbance changes in the photocycle of the photoactive yellow protein from Ectothiorhodospira halophila.

Authors:  W D Hoff; I H van Stokkum; H J van Ramesdonk; M E van Brederode; A M Brouwer; J C Fitch; T E Meyer; R van Grondelle; K J Hellingwerf
Journal:  Biophys J       Date:  1994-10       Impact factor: 4.033

8.  Cloning, sequencing, and expression of the fadD gene of Escherichia coli encoding acyl coenzyme A synthetase.

Authors:  P N Black; C C DiRusso; A K Metzger; T L Heimert
Journal:  J Biol Chem       Date:  1992-12-15       Impact factor: 5.157

9.  Sequence evidence for strong conservation of the photoactive yellow proteins from the halophilic phototrophic bacteria Chromatium salexigens and Rhodospirillum salexigens.

Authors:  M Koh; G Van Driessche; B Samyn; W D Hoff; T E Meyer; M A Cusanovich; J J Van Beeumen
Journal:  Biochemistry       Date:  1996-02-27       Impact factor: 3.162

10.  Isolation of a Saccharomyces cerevisiae long chain fatty acyl:CoA synthetase gene (FAA1) and assessment of its role in protein N-myristoylation.

Authors:  R J Duronio; L J Knoll; J I Gordon
Journal:  J Cell Biol       Date:  1992-05       Impact factor: 10.539

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  23 in total

1.  On the absorbance changes in the photocycle of the photoactive yellow protein: a quantum-chemical analysis.

Authors:  V Molina; M Merchán
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-03       Impact factor: 11.205

2.  Transient exposure of hydrophobic surface in the photoactive yellow protein monitored with Nile Red.

Authors:  Johnny Hendriks; Thomas Gensch; Lene Hviid; Michael A van Der Horst; Klaas J Hellingwerf; Jasper J van Thor
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

3.  Crystal structure of a photoactive yellow protein from a sensor histidine kinase: conformational variability and signal transduction.

Authors:  Sudarshan Rajagopal; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2003-01-31       Impact factor: 11.205

4.  Contrasting the excited-state dynamics of the photoactive yellow protein chromophore: protein versus solvent environments.

Authors:  Mikas Vengris; Michael A van der Horst; Goran Zgrablic; Ivo H M van Stokkum; Stefan Haacke; Majed Chergui; Klaas J Hellingwerf; Rienk van Grondelle; Delmar S Larsen
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

5.  Incoherent manipulation of the photoactive yellow protein photocycle with dispersed pump-dump-probe spectroscopy.

Authors:  Delmar S Larsen; Ivo H M van Stokkum; Mikas Vengris; Michael A van Der Horst; Frank L de Weerd; Klaas J Hellingwerf; Rienk van Grondelle
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

6.  Protein kinetics: structures of intermediates and reaction mechanism from time-resolved x-ray data.

Authors:  Marius Schmidt; Reinhard Pahl; Vukica Srajer; Spencer Anderson; Zhong Ren; Hyotcherl Ihee; Sudarshan Rajagopal; Keith Moffat
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-23       Impact factor: 11.205

7.  Blue light perception in bacteria.

Authors:  Stephan Braatsch; Gabriele Klug
Journal:  Photosynth Res       Date:  2004       Impact factor: 3.573

8.  Light-induced behavioral responses (;phototaxis') in prokaryotes.

Authors:  Judith P Armitage; Klaas J Hellingwerf
Journal:  Photosynth Res       Date:  2003       Impact factor: 3.573

9.  Influence of the crystalline state on photoinduced dynamics of photoactive yellow protein studied by ultraviolet-visible transient absorption spectroscopy.

Authors:  Sergey Yeremenko; Ivo H M van Stokkum; Keith Moffat; Klaas J Hellingwerf
Journal:  Biophys J       Date:  2006-03-02       Impact factor: 4.033

10.  On the involvement of single-bond rotation in the primary photochemistry of photoactive yellow protein.

Authors:  Andreas D Stahl; Marijke Hospes; Kushagra Singhal; Ivo van Stokkum; Rienk van Grondelle; Marie Louise Groot; Klaas J Hellingwerf
Journal:  Biophys J       Date:  2011-09-07       Impact factor: 4.033

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