Literature DB >> 8662824

High resolution NMR solution structure of the leucine zipper domain of the c-Jun homodimer.

F K Junius1, S I O'Donoghue, M Nilges, A S Weiss, G F King.   

Abstract

The solution structure of the c-Jun leucine zipper domain has been determined to high resolution using a new calculation protocol designed to handle highly ambiguous sets of interproton distance restraints. The domain comprises a coiled coil of parallel alpha-helices in which most of the hydrophobic residues are buried at the highly symmetrical dimer interface; this interface extends over 10 helical turns and is the most elongated protein domain solved to date using NMR methods. The backbone fold is very similar to that seen in crystal structures of the GCN4 and Jun-Fos leucine zippers; however, in contrast with these crystal structures, the Jun leucine zipper dimer appears to be devoid of favorable intermolecular electrostatic interactions. A polar asparagine residue, located at the dimer interface, forms the sole point of asymmetry in the structure; furthermore, the side chain of this residue is disordered due to motional averaging. This residue, which is highly conserved in the leucine zipper family of transcription factors, provides a destabilizing influence that is likely to facilitate the rapid exchange of zipper strands in vivo.

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Year:  1996        PMID: 8662824     DOI: 10.1074/jbc.271.23.13663

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  24 in total

1.  Structure and interactions of the carboxyl terminus of striated muscle alpha-tropomyosin: it is important to be flexible.

Authors:  Norma J Greenfield; Thomas Palm; Sarah E Hitchcock-DeGregori
Journal:  Biophys J       Date:  2002-11       Impact factor: 4.033

2.  A molecular dynamics study of the formation, stability, and oligomerization state of two designed coiled coils: possibilities and limitations.

Authors:  Angel Piñeiro; Alessandra Villa; Toni Vagt; Beate Koksch; Alan E Mark
Journal:  Biophys J       Date:  2005-09-08       Impact factor: 4.033

3.  Identification of TCP10L as primate-specific gene derived via segmental duplication and homodimerization of TCP10L through the leucine zipper motif.

Authors:  Zhaomin Zhong; Jianping Qiu; Xinya Chen; Bo Wan; Jun Ni; Yun Yang; Meirong Bai; Haoxing Zhang; Long Yu
Journal:  Mol Biol Rep       Date:  2007-03-22       Impact factor: 2.316

4.  Surveying polypeptide and protein domain conformation and association with FlAsH and ReAsH.

Authors:  Nathan W Luedtke; Rachel J Dexter; Daniel B Fried; Alanna Schepartz
Journal:  Nat Chem Biol       Date:  2007-11-04       Impact factor: 15.040

5.  Structures of three distinct activator-TFIID complexes.

Authors:  Wei-Li Liu; Robert A Coleman; Elizabeth Ma; Patricia Grob; Joyce L Yang; Yixi Zhang; Gina Dailey; Eva Nogales; Robert Tjian
Journal:  Genes Dev       Date:  2009-07-01       Impact factor: 11.361

6.  NMR spectroscopy and X-ray crystallography provide complementary information on the structure and dynamics of leucine zippers.

Authors:  G F King
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

7.  Measuring macromolecular diffusion using heteronuclear multiple-quantum pulsed-field-gradient NMR.

Authors:  A J Dingley; J P Mackay; G L Shaw; B D Hambly; G F King
Journal:  J Biomol NMR       Date:  1997-07       Impact factor: 2.835

8.  Calculation of symmetric multimer structures from NMR data using a priori knowledge of the monomer structure, co-monomer restraints, and interface mapping: The case of leucine zippers.

Authors:  S I O'Donoghue; G F King; M Nilges
Journal:  J Biomol NMR       Date:  1996-09       Impact factor: 2.835

9.  Solution structure of the coiled-coil trimerization domain from lung surfactant protein D.

Authors:  Helena Kovacs; Sean I O'Ddonoghue; Hans-Jürgen Hoppe; David Comfort; Kenneth B M Reid; lain D Campbell; Michael Nilges
Journal:  J Biomol NMR       Date:  2002-10       Impact factor: 2.835

10.  ProteinShader: illustrative rendering of macromolecules.

Authors:  Joseph R Weber
Journal:  BMC Struct Biol       Date:  2009-03-30
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