Literature DB >> 8662012

On malleability in the genetic code.

D W Schultz, M Yarus.   

Abstract

To explain now-numerous cases of codon reassignment (departure from the "universal" code), we suggest a pathway in which the transformed codon is temporarily ambiguous. All the unusual tRNA activities required have been demonstrated. In addition, the repetitive use of certain reassignments, the phylogenetic distribution of reassignments, and the properties of present-day reassinged tRNAs are each consistent with evolution of the code via an ambiguous translational intermediate.

Mesh:

Substances:

Year:  1996        PMID: 8662012     DOI: 10.1007/bf02352290

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  25 in total

1.  Codon reassignment (codon capture) in evolution.

Authors:  S Osawa; T H Jukes
Journal:  J Mol Evol       Date:  1989-04       Impact factor: 2.395

2.  Error propagation in viable cells.

Authors:  J Gallant; L Palmer
Journal:  Mech Ageing Dev       Date:  1979-04       Impact factor: 5.432

3.  Tryptophan transfer RNA as the UGA suppressor.

Authors:  D Hirsh
Journal:  J Mol Biol       Date:  1971-06-14       Impact factor: 5.469

4.  Directional mutation pressure, mutator mutations, and dynamics of molecular evolution.

Authors:  N Sueoka
Journal:  J Mol Evol       Date:  1993-08       Impact factor: 2.395

5.  Transfer RNA mutation and the malleability of the genetic code.

Authors:  D W Schultz; M Yarus
Journal:  J Mol Biol       Date:  1994-02-04       Impact factor: 5.469

6.  tRNA structure and ribosomal function. I. tRNA nucleotide 27-43 mutations enhance first position wobble.

Authors:  D W Schultz; M Yarus
Journal:  J Mol Biol       Date:  1994-02-04       Impact factor: 5.469

7.  Identification of amino acids inserted during suppression of UAA and UGA termination codons at the gag-pol junction of Moloney murine leukemia virus.

Authors:  Y X Feng; T D Copeland; S Oroszlan; A Rein; J G Levin
Journal:  Proc Natl Acad Sci U S A       Date:  1990-11       Impact factor: 11.205

8.  Cysteine tRNAs of plant origin as novel UGA suppressors.

Authors:  C Urban; H Beier
Journal:  Nucleic Acids Res       Date:  1995-11-25       Impact factor: 16.971

9.  Exceptional codon recognition by the glutamine tRNAs in Saccharomyces cerevisiae.

Authors:  I Edelman; M R Culbertson
Journal:  EMBO J       Date:  1991-06       Impact factor: 11.598

10.  Genetic code deviations in the ciliates: evidence for multiple and independent events.

Authors:  A B Tourancheau; N Tsao; L A Klobutcher; R E Pearlman; A Adoutte
Journal:  EMBO J       Date:  1995-07-03       Impact factor: 11.598

View more
  37 in total

Review 1.  Augmented genetic decoding: global, local and temporal alterations of decoding processes and codon meaning.

Authors:  Pavel V Baranov; John F Atkins; Martina M Yordanova
Journal:  Nat Rev Genet       Date:  2015-08-11       Impact factor: 53.242

2.  A unified model of codon reassignment in alternative genetic codes.

Authors:  Supratim Sengupta; Paul G Higgs
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

3.  Mitochondrial genetic codes evolve to match amino acid requirements of proteins.

Authors:  Jonathan Swire; Olivia P Judson; Austin Burt
Journal:  J Mol Evol       Date:  2005-01       Impact factor: 2.395

4.  Amino acid exchangeability and the adaptive code hypothesis.

Authors:  Arlin Stoltzfus; Lev Y Yampolsky
Journal:  J Mol Evol       Date:  2007-09-26       Impact factor: 2.395

5.  Genetic code ambiguity confers a selective advantage on Acinetobacter baylyi.

Authors:  Jamie M Bacher; William F Waas; David Metzgar; Valérie de Crécy-Lagard; Paul Schimmel
Journal:  J Bacteriol       Date:  2007-07-06       Impact factor: 3.490

6.  A comparative genomics analysis of codon reassignments reveals a link with mitochondrial proteome size and a mechanism of genetic code change via suppressor tRNAs.

Authors:  Steven E Massey; James R Garey
Journal:  J Mol Evol       Date:  2007-03-27       Impact factor: 2.395

7.  Adaptive antioxidant methionine accumulation in respiratory chain complexes explains the use of a deviant genetic code in mitochondria.

Authors:  Aline Bender; Parvana Hajieva; Bernd Moosmann
Journal:  Proc Natl Acad Sci U S A       Date:  2008-10-22       Impact factor: 11.205

8.  Revisiting the operational RNA code for amino acids: Ensemble attributes and their implications.

Authors:  Shaul Shaul; Dror Berel; Yoav Benjamini; Dan Graur
Journal:  RNA       Date:  2009-12-01       Impact factor: 4.942

9.  tRNA(2Gln) mutants that translate the CGA arginine codon as glutamine in Escherichia coli.

Authors:  F Tsai; J F Curran
Journal:  RNA       Date:  1998-12       Impact factor: 4.942

10.  Molecular reconstruction of a fungal genetic code alteration.

Authors:  Denisa D Mateus; João A Paredes; Yaiza Español; Lluís Ribas de Pouplana; Gabriela R Moura; Manuel A S Santos
Journal:  RNA Biol       Date:  2013-04-17       Impact factor: 4.652

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.