Literature DB >> 8652549

Modulation of a salt link does not affect binding of phosphate to its specific active transport receptor.

N Yao1, P S Ledvina, A Choudhary, F A Quiocho.   

Abstract

Electrostatic interactions are among the key forces determining the structure and function of proteins. These are exemplified in the liganded form of the receptor, a phosphate binding protein from Escherichia coli. The phosphate, completely dehydrated and buried in the receptor, is bound by 12 hydrogen bonds as well as a salt link with Arg 135. We have modulated the ionic attraction while preserving the hydrogen bonds by mutating Asp 137, also salt linked to Arg 135, to Asn, Gly or Thr. High-resolution crystallographic analysis revealed that Gly and Thr (but not Asn) mutant proteins have incorporated a more electronegative Cl- in place of the Asp carboxylate. That no dramatic effect on phosphate affinity was produced by these ionic perturbations indicates a major role for hydrogen bonds and other local dipoles in the binding and charge stabilization of ionic ligands.

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Year:  1996        PMID: 8652549     DOI: 10.1021/bi952686r

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  20 in total

1.  Evaluation of the relative stability of liganded versus ligand-free protein conformations using Simplicial Neighborhood Analysis of Protein Packing (SNAPP) method.

Authors:  Douglas B Sherman; Shuxing Zhang; J Bruce Pitner; Alexander Tropsha
Journal:  Proteins       Date:  2004-09-01

2.  Crystallographic and online spectral evidence for role of conformational change and conserved water in cytochrome oxidase proton pump.

Authors:  Jian Liu; Ling Qin; Shelagh Ferguson-Miller
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-04       Impact factor: 11.205

Review 3.  For whom the bell tolls? DING proteins in health and disease.

Authors:  Anne Berna; François Bernier; Eric Chabrière; Mikael Elias; Ken Scott; Andrew Suh
Journal:  Cell Mol Life Sci       Date:  2009-03-17       Impact factor: 9.261

4.  Measurement of Nucleotide Hydrolysis Using Fluorescent Biosensors for Phosphate.

Authors:  Simone Kunzelmann
Journal:  Methods Mol Biol       Date:  2021

5.  Dominant role of local dipolar interactions in phosphate binding to a receptor cleft with an electronegative charge surface: equilibrium, kinetic, and crystallographic studies.

Authors:  P S Ledvina; A L Tsai; Z Wang; E Koehl; F A Quiocho
Journal:  Protein Sci       Date:  1998-12       Impact factor: 6.725

6.  Crystal structure of the effector-binding domain of the trehalose-repressor of Escherichia coli, a member of the LacI family, in its complexes with inducer trehalose-6-phosphate and noninducer trehalose.

Authors:  U Hars; R Horlacher; W Boos; W Welte; K Diederichs
Journal:  Protein Sci       Date:  1998-12       Impact factor: 6.725

7.  Mechanisms of protein-ligand association and its modulation by protein mutations.

Authors:  Martin Held; Philipp Metzner; Jan-Hendrik Prinz; Frank Noé
Journal:  Biophys J       Date:  2011-02-02       Impact factor: 4.033

Review 8.  Artificial receptors for the recognition of phosphorylated molecules.

Authors:  Amanda E Hargrove; Sonia Nieto; Tianzhi Zhang; Jonathan L Sessler; Eric V Anslyn
Journal:  Chem Rev       Date:  2011-09-12       Impact factor: 60.622

9.  Negative electrostatic surface potential of protein sites specific for anionic ligands.

Authors:  P S Ledvina; N Yao; A Choudhary; F A Quiocho
Journal:  Proc Natl Acad Sci U S A       Date:  1996-06-25       Impact factor: 11.205

10.  Crystallization and preliminary X-ray diffraction analysis of the phosphate-binding protein PhoX from Xanthomonas citri.

Authors:  Vanessa R Pegos; Francisco Javier Medrano; Andrea Balan
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-11-14       Impact factor: 1.056

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