Literature DB >> 8639494

Reversal of the hydrogen bond to zinc ligand histidine-119 dramatically diminishes catalysis and enhances metal equilibration kinetics in carbonic anhydrase II.

C C Huang1, C A Lesburg, L L Kiefer, C A Fierke, D W Christianson.   

Abstract

Direct metal ligands to transition metals in metalloproteins exert a profound effect on protein-metal affinity and function. Indirect ligands, i.e., second-shell residues that hydrogen bond to direct metal ligands, typically exert more subtle effects on the chemical properties of the protein-metal complex. However, E117 of human carbonic anhydrase II (CAII), which is part of the E117-119-Zn(2+) triad, is a notable exception: E117-substituted CAIIs exhibit dramatically increased kinetics of zinc complexation, and the E117Q variant exhibits enormously diminished catalytic activity and sulfonamide affinity. The three-dimensional structures of zinc-bound and zinc-free E117Q CAII reveal no discrete structural changes in the active site that are responsible for enhanced zinc equilibration kinetics and decreased activity. Additionally, the structure of the acetazolamide complex is essentially identical to that of the wild-type enzyme despite the 10(4)-fold loss of enzyme-inhibitor affinity. We conclude, therefore, that the functional differences between E117Q and wild-type CAIIs arise from electrostatic and not structural differences in the active site. We propose that the E117Q substitution reverses the polarity of the residue 117-H119 hydrogen bond, thereby stabilizing H119 as a histidinate anion in the E117Q CAII holoenzyme. The additional negative charge in the first coordination sphere of the metal ion increases the pK(a) of the zinc-water ligand, destabilizes the transition state for CO(2) hydration, and facilitates the exchange of a zinc-histidine ligand with an additional water molecule by decreasing the stability of the tetrahedral zinc complex. These novel properties engineered into E117Q CAII facilitate the exploitation of CAII as a rapid and sensitive Zn(2+) biosensor.

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Year:  1996        PMID: 8639494     DOI: 10.1021/bi9526692

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  17 in total

1.  Computational design of a Zn2+ receptor that controls bacterial gene expression.

Authors:  M A Dwyer; L L Looger; H W Hellinga
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-19       Impact factor: 11.205

Review 2.  Carbonic anhydrase as a model for biophysical and physical-organic studies of proteins and protein-ligand binding.

Authors:  Vijay M Krishnamurthy; George K Kaufman; Adam R Urbach; Irina Gitlin; Katherine L Gudiksen; Douglas B Weibel; George M Whitesides
Journal:  Chem Rev       Date:  2008-03       Impact factor: 60.622

Review 3.  Neurotoxicity Linked to Dysfunctional Metal Ion Homeostasis and Xenobiotic Metal Exposure: Redox Signaling and Oxidative Stress.

Authors:  Carla Garza-Lombó; Yanahi Posadas; Liliana Quintanar; María E Gonsebatt; Rodrigo Franco
Journal:  Antioxid Redox Signal       Date:  2018-03-28       Impact factor: 8.401

4.  Zinc coordination geometry and ligand binding affinity: the structural and kinetic analysis of the second-shell serine 228 residue and the methionine 180 residue of the aminopeptidase from Vibrio proteolyticus.

Authors:  Niloufar J Ataie; Quyen Q Hoang; Megan P D Zahniser; Yupeng Tu; Amy Milne; Gregory A Petsko; Dagmar Ringe
Journal:  Biochemistry       Date:  2008-06-25       Impact factor: 3.162

5.  Quantitative imaging of mitochondrial and cytosolic free zinc levels in an in vitro model of ischemia/reperfusion.

Authors:  Bryan J McCranor; Rebecca A Bozym; Michele I Vitolo; Carol A Fierke; Linda Bambrick; Brian M Polster; Gary Fiskum; Richard B Thompson
Journal:  J Bioenerg Biomembr       Date:  2012-03-20       Impact factor: 2.945

6.  Retrostructural analysis of metalloproteins: application to the design of a minimal model for diiron proteins.

Authors:  A Lombardi; C M Summa; S Geremia; L Randaccio; V Pavone; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  2000-06-06       Impact factor: 11.205

7.  Exploring local flexibility/rigidity in psychrophilic and mesophilic carbonic anhydrases.

Authors:  R Chiuri; G Maiorano; A Rizzello; L L del Mercato; R Cingolani; R Rinaldi; M Maffia; P P Pompa
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

8.  Long wavelength fluorescence ratiometric zinc biosensor.

Authors:  Hui Hui Zeng; Evgenia G Matveeva; Andrea K Stoddard; Carol A Fierke; Richard B Thompson
Journal:  J Fluoresc       Date:  2013-01-24       Impact factor: 2.217

9.  High-resolution structure of human carbonic anhydrase II complexed with acetazolamide reveals insights into inhibitor drug design.

Authors:  Katherine H Sippel; Arthur H Robbins; John Domsic; Caroli Genis; Mavis Agbandje-McKenna; Robert McKenna
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-09-25

Review 10.  Carbonic anhydrase II-based metal ion sensing: Advances and new perspectives.

Authors:  Tamiika K Hurst; Da Wang; Richard B Thompson; Carol A Fierke
Journal:  Biochim Biophys Acta       Date:  2009-10-08
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