Literature DB >> 8639165

Simple sequences and the expanding genome.

J M Hancock1.   

Abstract

Recent analysis of the contribution of replication slippage to genome evolution shows that it has played a significant role in all species from eubacteria to humans. The overall level of repetition in genomes is related to genome size and to the degree of repetition that can be measured within individual ribosomal RNA genes, suggesting that the entire genome accepts simple sequences in a concerted manner when its size increases. Although coding sequences accept simple sequences much less readily than non-coding sequences, they accept some repeats, particularly (CAG)n, preferentially. This may have consequences for the evolution of the genes involved in trinucleotide expansion diseases and the transcriptional networks of which they may form a part.

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Year:  1996        PMID: 8639165     DOI: 10.1002/bies.950180512

Source DB:  PubMed          Journal:  Bioessays        ISSN: 0265-9247            Impact factor:   4.345


  38 in total

1.  Small, repetitive DNAs contribute significantly to the expanded mitochondrial genome of cucumber.

Authors:  J W Lilly; M J Havey
Journal:  Genetics       Date:  2001-09       Impact factor: 4.562

2.  Comparative genomic analysis of simple sequence repeats in three Plasmodium species.

Authors:  Suchi Tyagi; Meenu Sharma; Aparup Das
Journal:  Parasitol Res       Date:  2010-10-06       Impact factor: 2.289

3.  Association between simple sequence repeat-rich chromosome regions and intergenomic translocation breakpoints in natural populations of allopolyploid wild wheats.

Authors:  István Molnár; Marta Cifuentes; Annamária Schneider; Elena Benavente; Márta Molnár-Láng
Journal:  Ann Bot       Date:  2010-10-28       Impact factor: 4.357

4.  Expansion during PCR of short single-stranded DNA fragments carrying nonselfcomplementary dinucleotide or trinucleotide repeats.

Authors:  Nad'a Reichová; Jaroslav Kypr
Journal:  Mol Biol Rep       Date:  2003-09       Impact factor: 2.316

Review 5.  Mutational dynamics of microsatellites.

Authors:  Atul Bhargava; F F Fuentes
Journal:  Mol Biotechnol       Date:  2010-03       Impact factor: 2.695

6.  Next generation sequencing and FISH reveal uneven and nonrandom microsatellite distribution in two grasshopper genomes.

Authors:  Francisco J Ruiz-Ruano; Ángeles Cuadrado; Eugenia E Montiel; Juan Pedro M Camacho; María Dolores López-León
Journal:  Chromosoma       Date:  2014-11-12       Impact factor: 4.316

7.  Abundant microsatellite polymorphism in Saccharomyces cerevisiae, and the different distributions of microsatellites in eight prokaryotes and S. cerevisiae, result from strong mutation pressures and a variety of selective forces.

Authors:  D Field; C Wills
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

8.  Selection against frameshift mutations limits microsatellite expansion in coding DNA.

Authors:  D Metzgar; J Bytof; C Wills
Journal:  Genome Res       Date:  2000-01       Impact factor: 9.043

9.  Distinct frequency-distributions of homopolymeric DNA tracts in different genomes.

Authors:  K J Dechering; K Cuelenaere; R N Konings; J A Leunissen
Journal:  Nucleic Acids Res       Date:  1998-09-01       Impact factor: 16.971

10.  Cytomolecular discrimination of the Am chromosomes of Triticum monococcum and the A chromosomes of Triticum aestivum using microsatellite DNA repeats.

Authors:  Mária Megyeri; Péter Mikó; András Farkas; Márta Molnár-Láng; István Molnár
Journal:  J Appl Genet       Date:  2016-07-28       Impact factor: 3.240

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