Literature DB >> 8631878

Intrinsic activity and stability of bifunctional human UMP synthase and its two separate catalytic domains, orotate phosphoribosyltransferase and orotidine-5'-phosphate decarboxylase.

M J Yablonski1, D A Pasek, B D Han, M E Jones, T W Traut.   

Abstract

Human UMP synthase is a bifunctional protein containing two separate catalytic domains, orotate phosphoribosyltransferase (EC 2.4.2.10) and orotidine-5'-phosphate decarboxylase (EC 4.1.1.23). These studies address the question of why the last two reactions in pyrimidine nucleotide synthesis are catalyzed by a bifunctional enzyme in mammalian cells, but by two separate enzymes in microorganisms. From existing data on subunit associations of the respective enzymes and calculations showing the molar concentration of enzyme to be far lower in mammalian cells than in microorganisms, we hypothesize that the covalent union in UMP synthase stabilizes the domains containing the respective catalytic centers. Evidence supporting this hypothesis comes from studies of stability of enzyme activity in vitro, at physiological concentrations, of UMP synthase, the two isolated catalytic domains prepared by site-directed mutagenesis of UMP synthase, and the yeast ODCase. The two engineered domains have activities very similar to the native UMP synthase, but unlike the bifunctional protein, the domains are quite unstable under conditions promoting the dissociated monomer.

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Year:  1996        PMID: 8631878     DOI: 10.1074/jbc.271.18.10704

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  14 in total

1.  Anatomy of a proficient enzyme: the structure of orotidine 5'-monophosphate decarboxylase in the presence and absence of a potential transition state analog.

Authors:  B G Miller; A M Hassell; R Wolfenden; M V Milburn; S A Short
Journal:  Proc Natl Acad Sci U S A       Date:  2000-02-29       Impact factor: 11.205

2.  Crystallization and preliminary crystallographic analysis of orotidine 5'-monophosphate decarboxylase from the human malaria parasite Plasmodium falciparum.

Authors:  Sudaratana R Krungkrai; Keiji Tokuoka; Yukiko Kusakari; Tsuyoshi Inoue; Hiroaki Adachi; Hiroyoshi Matsumura; Kazufumi Takano; Satoshi Murakami; Yusuke Mori; Yasushi Kai; Jerapan Krungkrai; Toshihiro Horii
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2006-05-31

3.  Molecular cloning of the human UMP synthase gene and characterization of point mutations in two hereditary orotic aciduria families.

Authors:  M Suchi; H Mizuno; Y Kawai; T Tsuboi; S Sumi; K Okajima; M E Hodgson; H Ogawa; Y Wada
Journal:  Am J Hum Genet       Date:  1997-03       Impact factor: 11.025

4.  Proton transfer from C-6 of uridine 5'-monophosphate catalyzed by orotidine 5'-monophosphate decarboxylase: formation and stability of a vinyl carbanion intermediate and the effect of a 5-fluoro substituent.

Authors:  Wing-Yin Tsang; B McKay Wood; Freeman M Wong; Weiming Wu; John A Gerlt; Tina L Amyes; John P Richard
Journal:  J Am Chem Soc       Date:  2012-08-21       Impact factor: 15.419

Review 5.  Purine and pyrimidine pathways as targets in Plasmodium falciparum.

Authors:  María Belén Cassera; Yong Zhang; Keith Z Hazleton; Vern L Schramm
Journal:  Curr Top Med Chem       Date:  2011       Impact factor: 3.295

6.  Inhibition of de novo pyrimidine synthesis in growing potato tubers leads to a compensatory stimulation of the pyrimidine salvage pathway and a subsequent increase in biosynthetic performance.

Authors:  Peter Geigenberger; Babette Regierer; Adriano Nunes-Nesi; Andrea Leisse; Ewa Urbanczyk-Wochniak; Franziska Springer; Joost T van Dongen; Jens Kossmann; Alisdair R Fernie
Journal:  Plant Cell       Date:  2005-06-10       Impact factor: 11.277

7.  Transition state analogues of Plasmodium falciparum and human orotate phosphoribosyltransferases.

Authors:  Yong Zhang; Gary B Evans; Keith Clinch; Douglas R Crump; Lawrence D Harris; Richard F G Fröhlich; Peter C Tyler; Keith Z Hazleton; María B Cassera; Vern L Schramm
Journal:  J Biol Chem       Date:  2013-10-24       Impact factor: 5.157

8.  Transition states of Plasmodium falciparum and human orotate phosphoribosyltransferases.

Authors:  Yong Zhang; Minkui Luo; Vern L Schramm
Journal:  J Am Chem Soc       Date:  2009-04-08       Impact factor: 15.419

9.  QM/MM metadynamics study of the direct decarboxylation mechanism for orotidine-5'-monophosphate decarboxylase using two different QM regions: acceleration too small to explain rate of enzyme catalysis.

Authors:  Courtney L Stanton; I-Feng W Kuo; Christopher J Mundy; Teodoro Laino; K N Houk
Journal:  J Phys Chem B       Date:  2007-10-10       Impact factor: 2.991

10.  Discovery of a Broad-Spectrum Antiviral Compound That Inhibits Pyrimidine Biosynthesis and Establishes a Type 1 Interferon-Independent Antiviral State.

Authors:  Dong-Hoon Chung; Jennifer E Golden; Robert S Adcock; Chad E Schroeder; Yong-Kyu Chu; Julie B Sotsky; Daniel E Cramer; Paula M Chilton; Chisu Song; Manu Anantpadma; Robert A Davey; Aminul I Prodhan; Xinmin Yin; Xiang Zhang
Journal:  Antimicrob Agents Chemother       Date:  2016-07-22       Impact factor: 5.191

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