Literature DB >> 8610159

The crystal structure of human glycosylation-inhibiting factor is a trimeric barrel with three 6-stranded beta-sheets.

Y Kato1, T Muto, T Tomura, H Tsumura, H Watarai, T Mikayama, K Ishizaka, R Kuroki.   

Abstract

Glycosylation-inhibiting factor (GIF) is a cytokine that is involved in the regulation of IgE synthesis. The crystal structure of recombinant human GIF was determined by the multiple isomorphous replacement method. The structure was refined to an R factor of 0.168 at 1.9 angstrom resolution. The overall structure is seen to consist of three interconnected subunits forming a barrel with three 6-stranded beta-sheets on the inside and six alpha-helices on the outside. There is a 5-angstrom-diameter "hole" through the middle of the barrel. The barrel structure of GIF in part resembles other "trefoil" cytokines such as interleukin 1 and fibroblast growth factor. Each subunit has a new class of alpha + beta sandwich structure consisting of two beta-alpha-beta motifs. These beta-alpha-beta motifs are related by a pseudo-twofold axis and resemble both interleukin 8 and the peptide binding domain of major histocompatibility complex protein, although the topology of the polypeptide chain is quite different.

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Year:  1996        PMID: 8610159      PMCID: PMC39751          DOI: 10.1073/pnas.93.7.3007

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  31 in total

1.  The structure of tumor necrosis factor-alpha at 2.6 A resolution. Implications for receptor binding.

Authors:  M J Eck; S R Sprang
Journal:  J Biol Chem       Date:  1989-10-15       Impact factor: 5.157

2.  Three-dimensional structures of acidic and basic fibroblast growth factors.

Authors:  X Zhu; H Komiya; A Chirino; S Faham; G M Fox; T Arakawa; B T Hsu; D C Rees
Journal:  Science       Date:  1991-01-04       Impact factor: 47.728

3.  Construction of antigen-specific suppressor T cell hybridomas from spleen cells of mice primed for the persistent IgE antibody formation.

Authors:  M Iwata; K Ishizaka
Journal:  J Immunol       Date:  1988-11-15       Impact factor: 5.422

4.  A monoclonal antibody raised to lipomodulin recognizes T suppressor factors in two independent hapten-specific suppressor networks.

Authors:  J K Steele; V K Kuchroo; H Kawasaki; S Jayaraman; M Iwata; K Ishizaka; M E Dorf
Journal:  J Immunol       Date:  1989-04-01       Impact factor: 5.422

5.  Comparison of spatial arrangements of secondary structural elements in proteins.

Authors:  K Mizuguchi; N Go
Journal:  Protein Eng       Date:  1995-04

6.  Resolution of phase ambiguity in macromolecular crystallography.

Authors:  B C Wang
Journal:  Methods Enzymol       Date:  1985       Impact factor: 1.600

7.  Crystal structure of recombinant human interleukin-1 beta at 2.0 A resolution.

Authors:  B C Finzel; L L Clancy; D R Holland; S W Muchmore; K D Watenpaugh; H M Einspahr
Journal:  J Mol Biol       Date:  1989-10-20       Impact factor: 5.469

8.  Three-dimensional structure of human basic fibroblast growth factor.

Authors:  A E Eriksson; L S Cousens; L H Weaver; B W Matthews
Journal:  Proc Natl Acad Sci U S A       Date:  1991-04-15       Impact factor: 11.205

9.  Crystallographic refinement of interleukin 1 beta at 2.0 A resolution.

Authors:  J P Priestle; H P Schär; M G Grütter
Journal:  Proc Natl Acad Sci U S A       Date:  1989-12       Impact factor: 11.205

10.  Structure of tumour necrosis factor.

Authors:  E Y Jones; D I Stuart; N P Walker
Journal:  Nature       Date:  1989-03-16       Impact factor: 49.962

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  10 in total

1.  Macrophage migration inhibitory factor of the parasitic nematode Trichinella spiralis.

Authors:  T H Tan; S A Edgerton; R Kumari; M S McAlister; S M Roe; S Nagl; L H Pearl; M E Selkirk; A E Bianco; N F Totty; C Engwerda; C A Gray; D J Meyer; S M Rowe
Journal:  Biochem J       Date:  2001-07-15       Impact factor: 3.857

2.  High-affinity binding of bioactive glycosylation-inhibiting factor to antigen-primed T cells and natural killer cells.

Authors:  K Sugie; T Nakano; T Tomura; K Takakura; T Mikayama; K Ishizaka
Journal:  Proc Natl Acad Sci U S A       Date:  1997-05-13       Impact factor: 11.205

3.  Interaction of macrophage-migration-inhibitory factor with haematin.

Authors:  J L Pennock; J Wipasa; M P Gordge; D J Meyer
Journal:  Biochem J       Date:  1998-05-01       Impact factor: 3.857

4.  Neutralization of macrophage migration inhibitory factor (MIF) by fully human antibodies correlates with their specificity for the β-sheet structure of MIF.

Authors:  Randolf J Kerschbaumer; Manfred Rieger; Dirk Völkel; Didier Le Roy; Thierry Roger; Jurate Garbaraviciene; Wolf-Henning Boehncke; Jürgen Müllberg; Rene M Hoet; Clive R Wood; Gerhard Antoine; Michael Thiele; Helga Savidis-Dacho; Michael Dockal; Hartmut Ehrlich; Thierry Calandra; Friedrich Scheiflinger
Journal:  J Biol Chem       Date:  2012-01-11       Impact factor: 5.157

5.  Posttranslational modification of the glycosylation inhibiting factor (GIF) gene product generates bioactive GIF.

Authors:  H Watarai; R Nozawa; A Tokunaga; N Yuyama; M Tomas; A Hinohara; K Ishizaka; Y Ishii
Journal:  Proc Natl Acad Sci U S A       Date:  2000-11-21       Impact factor: 11.205

6.  Conversion of inactive glycosylation inhibiting factor to bioactive derivatives by modification of a SH group.

Authors:  T Nakano; H Watarai; Y C Liu; Y Oyama; T Mikayama; K Ishizaka
Journal:  Proc Natl Acad Sci U S A       Date:  1997-01-07       Impact factor: 11.205

7.  MIF intersubunit disulfide mutant antagonist supports activation of CD74 by endogenous MIF trimer at physiologic concentrations.

Authors:  Chengpeng Fan; Deepa Rajasekaran; Mansoor Ali Syed; Lin Leng; J Patrick Loria; Vineet Bhandari; Richard Bucala; Elias J Lolis
Journal:  Proc Natl Acad Sci U S A       Date:  2013-06-17       Impact factor: 11.205

8.  Direct link between cytokine activity and a catalytic site for macrophage migration inhibitory factor.

Authors:  M Swope; H W Sun; P R Blake; E Lolis
Journal:  EMBO J       Date:  1998-07-01       Impact factor: 11.598

9.  Inhibition of an established allergic response to ovalbumin in BALB/c mice by killed Mycobacterium vaccae.

Authors:  C C Wang; G A Rook
Journal:  Immunology       Date:  1998-03       Impact factor: 7.397

10.  Crystallographic and receptor binding characterization of Plasmodium falciparum macrophage migration inhibitory factor complexed to two potent inhibitors.

Authors:  Georgios Pantouris; Deepa Rajasekaran; Alvaro Baeza Garcia; Victor G Ruiz; Lin Leng; William L Jorgensen; Richard Bucala; Elias J Lolis
Journal:  J Med Chem       Date:  2014-10-08       Impact factor: 7.446

  10 in total

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