Literature DB >> 8590463

Identification and characterization of the Arabidopsis thaliana chloroplast DNA region containing the genes psbA, trnH and rps19'.

K Liere1, M Kestermann, U Müller, G Link.   

Abstract

A 1887-nucleotide chloroplast-DNA region from Arabidopsis thaliana was analyzed. It contains the conserved genes psbA for the precursor of the D1 reaction-centre protein of photosystem II, trnH for tRNAHis, and rps19' for the 6.8-kDa protein of the small ribosomal subunit. Northern hybridization and RNase protection experiments suggest co-transcription of a minor RNA fraction over the full lengths of psbA and the preceding trnK-UUU gene, but not including downstream trnH sequences. In front of the mapped 5' end of the major 1.2-kb psbA transcript is a DNA region that shows the typical architecture of a psbA promoter, consisting of the prokaryotic-type '-35' and '-10' elements as well as the eukaryotic-type 'TATA' motif. The common 3' end of psbA transcripts seems to be located immediately after a stem-loop structure downstream from the coding region.

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Year:  1995        PMID: 8590463     DOI: 10.1007/bf00315778

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  15 in total

Review 1.  Arabidopsis, a useful weed.

Authors:  E M Meyerowitz
Journal:  Cell       Date:  1989-01-27       Impact factor: 41.582

Review 2.  The chloroplast genome.

Authors:  M Sugiura
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

3.  Transcript levels of two adjacent chloroplast genes during mustard (Sinapis alba L.) seedling development are under differential temporal and light control.

Authors:  J E Hughes; H Neuhaus; G Link
Journal:  Plant Mol Biol       Date:  1987-07       Impact factor: 4.076

4.  The 54 kDa RNA-binding protein from mustard chloroplasts mediates endonucleolytic transcript 3' end formation in vitro.

Authors:  J Nickelsen; G Link
Journal:  Plant J       Date:  1993-04       Impact factor: 6.417

Review 5.  Plastid differentiation: organelle promoters and transcription factors.

Authors:  G Link
Journal:  Results Probl Cell Differ       Date:  1994

6.  Junctions of the large single copy region and the inverted repeats in Spinacia oleracea and Nicotiana debneyi chloroplast DNA: sequence of the genes for tRNAHis and the ribosomal proteins S19 and L2.

Authors:  G Zurawski; W Bottomley; P R Whitfeld
Journal:  Nucleic Acids Res       Date:  1984-08-24       Impact factor: 16.971

7.  The role of insertions/deletions in the evolution of the intergenic region between psbA and trnH in the chloroplast genome.

Authors:  J Aldrich; B W Cherney; E Merlin; L Christopherson
Journal:  Curr Genet       Date:  1988-08       Impact factor: 3.886

8.  Separate photosensory pathways co-regulate blue light/ultraviolet-A-activated psbD-psbC transcription and light-induced D2 and CP43 degradation in barley (Hordeum vulgare) chloroplasts.

Authors:  D A Christopher; J E Mullet
Journal:  Plant Physiol       Date:  1994-04       Impact factor: 8.340

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Authors:  J K Stevenson; R B Hallick
Journal:  Plant J       Date:  1994-02       Impact factor: 6.417

10.  In vitro transcription and DNA binding characteristics of chloroplast and etioplast extracts from mustard (Sinapis alba) indicate differential usage of the psbA promoter.

Authors:  A Eisermann; K Tiller; G Link
Journal:  EMBO J       Date:  1990-12       Impact factor: 11.598

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  10 in total

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2.  Chloroplast endoribonuclease p54 involved in RNA 3'-end processing is regulated by phosphorylation and redox state.

Authors:  K Liere; G Link
Journal:  Nucleic Acids Res       Date:  1997-06-15       Impact factor: 16.971

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4.  Ebb and flow of the chloroplast inverted repeat.

Authors:  S E Goulding; R G Olmstead; C W Morden; K H Wolfe
Journal:  Mol Gen Genet       Date:  1996-08-27

5.  Molecular genetic analysis of chloroplast gene promoters dependent on SIG2, a nucleus-encoded sigma factor for the plastid-encoded RNA polymerase, in Arabidopsis thaliana.

Authors:  Mitsumasa Hanaoka; Kengo Kanamaru; Hideo Takahashi; Kan Tanaka
Journal:  Nucleic Acids Res       Date:  2003-12-15       Impact factor: 16.971

6.  Reverse protection assay: a tool to analyze transcriptional rates from individual promoters.

Authors:  Yan O Zubo; Victor V Kusnetsov; Thomas Börner; Karsten Liere
Journal:  Plant Methods       Date:  2011-12-20       Impact factor: 4.993

7.  High diversity of plastidial promoters in Arabidopsis thaliana.

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Journal:  Mol Genet Genomics       Date:  2007-03-01       Impact factor: 2.980

8.  High-resolution map of plastid-encoded RNA polymerase binding patterns demonstrates a major role of transcription in chloroplast gene expression.

Authors:  V Miguel Palomar; Sarah Jaksich; Sho Fujii; Jan Kuciński; Andrzej T Wierzbicki
Journal:  Plant J       Date:  2022-07-13       Impact factor: 7.091

9.  Chloroplast ribosome release factor 1 (AtcpRF1) is essential for chloroplast development.

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Journal:  Plant Mol Biol       Date:  2007-04-21       Impact factor: 4.335

10.  Processing of the psbA 5' untranslated region in Chlamydomonas reinhardtii depends upon factors mediating ribosome association.

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