Literature DB >> 8589693

A duplication/paracentric inversion associated with familial X-linked deafness (DFN3) suggests the presence of a regulatory element more than 400 kb upstream of the POU3F4 gene.

Y J de Kok1, G F Merkx, S M van der Maarel, I Huber, S Malcolm, H H Ropers, F P Cremers.   

Abstract

X-linked deafness with stapes fixation (DFN3) is caused by mutations in the POU3F4 gene at Xq21.1. By employing pulsed field gel electrophoresis (PFGE) we identified a chromosomal aberration in the DNA of a DFN3 patient who did not show alterations in the open reading frame (ORF) of POU3F4. Southern blot analysis indicated that a DNA segment of 150 kb, located 170 kb proximal to the POU3F4 gene, was duplicated. Fluorescence in situ hybridization (FISH) analysis, PFGE, and detailed Southern analysis revealed that this duplication is part of a more complex rearrangement including a paracentric inversion involving the Xq21.1 region, and presumably the Xq21.3 region. Since at least two DFN3-associated minideletions are situated proximal to the duplicated segment, the inversion most likely disconnects the POU3F4 gene from a regulatory element which is located at a distance of at least 400 kb upstream of the POU3F4 gene.

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Year:  1995        PMID: 8589693     DOI: 10.1093/hmg/4.11.2145

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  27 in total

1.  Transcriptional control of SLC26A4 is involved in Pendred syndrome and nonsyndromic enlargement of vestibular aqueduct (DFNB4).

Authors:  Tao Yang; Hilmar Vidarsson; Sandra Rodrigo-Blomqvist; Sally S Rosengren; Sven Enerback; Richard J H Smith
Journal:  Am J Hum Genet       Date:  2007-04-23       Impact factor: 11.025

2.  Deletion of and novel missense mutation in POU3F4 in 2 families segregating X-linked nonsyndromic deafness.

Authors:  Abram P Vore; Eugene H Chang; Jane E Hoppe; Merlin G Butler; Shawnia Forrester; Michael C Schneider; Luke L H Smith; Daniel W Burke; Colleen A Campbell; Richard J H Smith
Journal:  Arch Otolaryngol Head Neck Surg       Date:  2005-12

Review 3.  Current concepts of follicle-stimulating hormone receptor gene regulation.

Authors:  Jitu W George; Elizabeth A Dille; Leslie L Heckert
Journal:  Biol Reprod       Date:  2010-08-25       Impact factor: 4.285

4.  X-linked deafness-2 (DFNX2) phenotype associated with a paracentric inversion upstream of POU3F4.

Authors:  Gregory J Anger; Susan Crocker; Kyle McKenzie; Kerry K Brown; Cynthia C Morton; Karen Harrison; Jennifer J MacKenzie
Journal:  Am J Audiol       Date:  2014-03       Impact factor: 1.493

Review 5.  Enhancer deregulation in cancer and other diseases.

Authors:  Hans-Martin Herz
Journal:  Bioessays       Date:  2016-08-29       Impact factor: 4.345

Review 6.  Genomic identification of regulatory elements by evolutionary sequence comparison and functional analysis.

Authors:  Gabriela G Loots
Journal:  Adv Genet       Date:  2008       Impact factor: 1.944

7.  Multiple enhancers located in a 1-Mb region upstream of POU3F4 promote expression during inner ear development and may be required for hearing.

Authors:  Silvia Naranjo; Krysta Voesenek; Elisa de la Calle-Mustienes; Alex Robert-Moreno; Haris Kokotas; Maria Grigoriadou; John Economides; Guy Van Camp; Nele Hilgert; Felipe Moreno; Berta Alsina; Michael B Petersen; Hannie Kremer; José Luis Gómez-Skarmeta
Journal:  Hum Genet       Date:  2010-07-29       Impact factor: 4.132

8.  Genome Sequencing of Autism-Affected Families Reveals Disruption of Putative Noncoding Regulatory DNA.

Authors:  Tychele N Turner; Fereydoun Hormozdiari; Michael H Duyzend; Sarah A McClymont; Paul W Hook; Ivan Iossifov; Archana Raja; Carl Baker; Kendra Hoekzema; Holly A Stessman; Michael C Zody; Bradley J Nelson; John Huddleston; Richard Sandstrom; Joshua D Smith; David Hanna; James M Swanson; Elaine M Faustman; Michael J Bamshad; John Stamatoyannopoulos; Deborah A Nickerson; Andrew S McCallion; Robert Darnell; Evan E Eichler
Journal:  Am J Hum Genet       Date:  2015-12-31       Impact factor: 11.025

9.  Association of bone morphogenetic proteins with otosclerosis.

Authors:  Isabelle Schrauwen; Melissa Thys; Kathleen Vanderstraeten; Erik Fransen; Nele Dieltjens; Jeroen R Huyghe; Megan Ealy; Mireille Claustres; Cor R W J Cremers; Ingeborg Dhooge; Frank Declau; Paul Van de Heyning; Robert Vincent; Thomas Somers; Erwin Offeciers; Richard J H Smith; Guy Van Camp
Journal:  J Bone Miner Res       Date:  2008-04       Impact factor: 6.741

10.  [Clinical and molecular genetic analysis of monozygotic twins displaying stapes gusher syndrome (DFN3)].

Authors:  N Oh; S Kupka; F Mirghomizadeh; R Arold; R Zimmermann; N Blin; H P Zenner; M Pfister
Journal:  HNO       Date:  2003-04-11       Impact factor: 1.284

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