Literature DB >> 8550506

Further stabilization of 3-isopropylmalate dehydrogenase of an extreme thermophile, Thermus thermophilus, by a suppressor mutation method.

T Kotsuka1, S Akanuma, M Tomuro, A Yamagishi, T Oshima.   

Abstract

We succeeded in further improvement of the stability of 3-isopropylmalate dehydrogenase (IPMDH) from an extreme thermophile, Thermus thermophilus, by a suppressor mutation method. We previously constructed a chimeric IPMDH consisting of portions of thermophile and mesophile enzymes. The chimeric enzyme is less thermostable than the thermophile enzyme. The gene encoding the chimeric enzyme was subjected to random mutagenesis and integrated into the genome of a leuB-deficient mutant of T. thermophilus. The transformants were screened at 76 degrees C in minimum medium, and three independent stabilized mutants were obtained. The leuB genes from these three mutants were cloned and analyzed. The sequence analyses revealed Ala-172-->Val substitution in all of the mutants. The thermal stability of the thermophile IPMDH was improved by introducing the amino acid substitution.

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Year:  1996        PMID: 8550506      PMCID: PMC177718          DOI: 10.1128/jb.178.3.723-727.1996

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  33 in total

1.  Recombination-Deficient Mutants of an Extreme Thermophile, Thermus thermophilus.

Authors:  T Takada; S Akanuma; T Kotsuka; M Tamakoshi; A Yamagishi; T Oshima
Journal:  Appl Environ Microbiol       Date:  1993-08       Impact factor: 4.792

2.  Influence of interior packing and hydrophobicity on the stability of a protein.

Authors:  W S Sandberg; T C Terwilliger
Journal:  Science       Date:  1989-07-07       Impact factor: 47.728

3.  Dependence of conformational stability on hydrophobicity of the amino acid residue in a series of variant proteins substituted at a unique position of tryptophan synthase alpha subunit.

Authors:  K Yutani; K Ogasahara; T Tsujita; Y Sugino
Journal:  Proc Natl Acad Sci U S A       Date:  1987-07       Impact factor: 11.205

4.  Enhanced protein thermostability from designed mutations that interact with alpha-helix dipoles.

Authors:  H Nicholson; W J Becktel; B W Matthews
Journal:  Nature       Date:  1988-12-15       Impact factor: 49.962

5.  The nucleotide sequence of 3-isopropylmalate dehydrogenase gene from Bacillus subtilis.

Authors:  R Imai; T Sekiguchi; Y Nosoh; K Tsuda
Journal:  Nucleic Acids Res       Date:  1987-06-25       Impact factor: 16.971

6.  Amino acid residues stabilizing a Bacillus alpha-amylase against irreversible thermoinactivation.

Authors:  Y Suzuki; N Ito; T Yuuki; H Yamagata; S Udaka
Journal:  J Biol Chem       Date:  1989-11-15       Impact factor: 5.157

7.  Energetics of complementary side-chain packing in a protein hydrophobic core.

Authors:  J T Kellis; K Nyberg; A R Fersht
Journal:  Biochemistry       Date:  1989-05-30       Impact factor: 3.162

8.  Directed mutagenesis in an asporogenous methylotrophic yeast: cloning, sequencing, and one-step gene disruption of the 3-isopropylmalate dehydrogenase gene (LEU2) of Candida boidinii to derive doubly auxotrophic marker strains.

Authors:  Y Sakai; Y Tani
Journal:  J Bacteriol       Date:  1992-09       Impact factor: 3.490

9.  Molecular cloning and nucleotide sequence of the 3-isopropylmalate dehydrogenase gene of Candida utilis.

Authors:  K Hamasawa; Y Kobayashi; S Harada; K Yoda; M Yamasaki; G Tamura
Journal:  J Gen Microbiol       Date:  1987-04

10.  The Yarrowia lipolytica LEU2 gene.

Authors:  L S Davidow; F S Kaczmarek; J R DeZeeuw; S W Conlon; M R Lauth; D A Pereira; A E Franke
Journal:  Curr Genet       Date:  1987       Impact factor: 3.886

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  9 in total

1.  Thermal adaptation analyzed by comparison of protein sequences from mesophilic and extremely thermophilic Methanococcus species.

Authors:  P J Haney; J H Badger; G L Buldak; C I Reich; C R Woese; G J Olsen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-30       Impact factor: 11.205

2.  Experimental evolution of a green fluorescent protein composed of 19 unique amino acids without tryptophan.

Authors:  Akio Kawahara-Kobayashi; Mitsuhiro Hitotsuyanagi; Kazuaki Amikura; Daisuke Kiga
Journal:  Orig Life Evol Biosph       Date:  2014-11-16       Impact factor: 1.950

3.  Spontaneous tandem sequence duplications reverse the thermal stability of carboxyl-terminal modified 3-isopropylmalate dehydrogenase.

Authors:  S Akanuma; A Yamagishi; N Tanaka; T Oshima
Journal:  J Bacteriol       Date:  1996-11       Impact factor: 3.490

Review 4.  In vivo versus in vitro screening or selection for catalytic activity in enzymes and abzymes.

Authors:  J Fastrez
Journal:  Mol Biotechnol       Date:  1997-02       Impact factor: 2.695

5.  Production of recombinant alpha-galactosidases in Thermus thermophilus.

Authors:  O Fridjonsson; R Mattes
Journal:  Appl Environ Microbiol       Date:  2001-09       Impact factor: 4.792

6.  Serial increase in the thermal stability of 3-isopropylmalate dehydrogenase from Bacillus subtilis by experimental evolution.

Authors:  S Akanuma; A Yamagishi; N Tanaka; T Oshima
Journal:  Protein Sci       Date:  1998-03       Impact factor: 6.725

7.  A new Thermus-Escherichia coli shuttle integration vector system.

Authors:  M Tamakoshi; M Uchida; K Tanabe; S Fukuyama; A Yamagishi; T Oshima
Journal:  J Bacteriol       Date:  1997-08       Impact factor: 3.490

8.  Thermoadaptation of alpha-galactosidase AgaB1 in Thermus thermophilus.

Authors:  Olafur Fridjonsson; Hildegard Watzlawick; Ralf Mattes
Journal:  J Bacteriol       Date:  2002-06       Impact factor: 3.490

9.  Deciphering the Dynamics of Non-Covalent Interactions Affecting Thermal Stability of a Protein: Molecular Dynamics Study on Point Mutant of Thermus thermophilus Isopropylmalate Dehydrogenase.

Authors:  Reetu Sharma; G Narahari Sastry
Journal:  PLoS One       Date:  2015-12-11       Impact factor: 3.240

  9 in total

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