Literature DB >> 8526512

Direct sequencing of hepatitis A virus strains isolated during an epidemic in France.

V Apaire-Marchais1, B H Robertson, V Aubineau-Ferre, M G Le Roux, F Leveque, L Schwartzbrod, S Billaudel.   

Abstract

Direct sequencing of PCR products was used to study the VP1 region of the hepatitis A virus (HAV) genome (position 2199 to 2356) of nine strains isolated from human stools collected during a hepatitis A epidemic (western France, 1992), three strains from environmental samples (1990, 1991, and 1992), and two HAV cell culture isolates (the French strain CF53/Lyon and strain CLF). These viruses differed from CF53/Lyon (genotype I) by between 1 and 10.3%, and results indicated the existence of two groups of strains belonging to two different subgenotypes (IA and IB). With this sequencing technique it was possible to monitor the epidemiology of HAV and study its relations.

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Year:  1995        PMID： 8526512      PMCID： PMC167705          DOI： 10.1128/aem.61.11.3977-3980.1995

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN： 0099-2240            Impact factor:   4.792


  10 in total

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Authors:  R Najarian; D Caput; W Gee; S J Potter; A Renard; J Merryweather; G Van Nest; D Dina
Journal:  Proc Natl Acad Sci U S A       Date:  1985-05       Impact factor: 11.205

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Authors:  F Le Guyader; V Apaire-Marchais; J Brillet; S Billaudel
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4.  Complete nucleotide sequence of wild-type hepatitis A virus: comparison with different strains of hepatitis A virus and other picornaviruses.

Authors:  J I Cohen; J R Ticehurst; R H Purcell; A Buckler-White; B M Baroudy
Journal:  J Virol       Date:  1987-01       Impact factor: 5.103

5.  Molecular epidemiology of human hepatitis A virus defined by an antigen-capture polymerase chain reaction method.

Authors:  R W Jansen; G Siegl; S M Lemon
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

6.  Altered hepatitis A VP1 protein resulting from cell culture propagation of virus.

Authors:  B H Robertson; V K Brown; B Khanna
Journal:  Virus Res       Date:  1989-07       Impact factor: 3.303

7.  Epidemiologic patterns of wild-type hepatitis A virus determined by genetic variation.

Authors:  B H Robertson; B Khanna; O V Nainan; H S Margolis
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Authors:  S M Lemon; R W Jansen; E A Brown
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Authors:  V Apaire-Marchais; V Ferre-Aubineau; F Colonna; F Dubois; A Ponge; S Billaudel
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Authors:  B H Robertson; R W Jansen; B Khanna; A Totsuka; O V Nainan; G Siegl; A Widell; H S Margolis; S Isomura; K Ito
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  10 in total
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3.  Three-year study to assess human enteric viruses in shellfish.

Authors:  F Le Guyader; L Haugarreau; L Miossec; E Dubois; M Pommepuy
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Authors:  Y M Jee; U Go; D Cheon; Y Kang; J-D Yoon; S-W Lee; Y H Shin; K-S Kim; J-K Lee; E-K Jeong; B-K Yang; H W Cho
Journal:  Epidemiol Infect       Date:  2006-02       Impact factor: 2.451

5.  Genotyping and Molecular Diagnosis of Hepatitis A Virus in Human Clinical Samples Using Multiplex PCR-Based Next-Generation Sequencing.

Authors:  Geum-Young Lee; Won-Keun Kim; Seungchan Cho; Kyungmin Park; Jongwoo Kim; Seung-Ho Lee; Jingyeong Lee; Young-Sun Lee; Ji Hoon Kim; Kwan Soo Byun; Jin-Won Song
Journal:  Microorganisms       Date:  2022-01-04
  5 in total

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