Literature DB >> 8513319

Genomic mismatch scanning: a new approach to genetic linkage mapping.

S F Nelson1, J H McCusker, M A Sander, Y Kee, P Modrich, P O Brown.   

Abstract

Genomic mismatch scanning (GMS) is a new method of genetic linkage analysis that does not require conventional polymorphic markers or gel electrophoresis. GMS is ideally suited to affected-relative-pair mapping. DNA fragments from all regions of identity-by-descent between two relatives are isolated based on their ability to form extensive mismatch-free hybrid molecules. The genomic origin of this selected pool of DNA fragments is then mapped in a single hybridization step. Here we demonstrate the practicality of GMS in a model organism, Saccharomyces cerevisiae. GMS is likely to be applicable to other organisms, including humans, and may be of particular value in mapping complex genetic traits.

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Year:  1993        PMID: 8513319     DOI: 10.1038/ng0593-11

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  29 in total

1.  A resource of mapped human bacterial artificial chromosome clones.

Authors:  V G Cheung; H L Dalrymple; S Narasimhan; J Watts; G Schuler; A K Raap; M Morley; A Bruzel
Journal:  Genome Res       Date:  1999-10       Impact factor: 9.043

2.  A maize map standard with sequenced core markers, grass genome reference points and 932 expressed sequence tagged sites (ESTs) in a 1736-locus map.

Authors:  G L Davis; M D McMullen; C Baysdorfer; T Musket; D Grant; M Staebell; G Xu; M Polacco; L Koster; S Melia-Hancock; K Houchins; S Chao; E H Coe
Journal:  Genetics       Date:  1999-07       Impact factor: 4.562

3.  CIS--cloning of identical sequences between two complex genomes.

Authors:  V Zabarovska; J Li; O Muravenko; L Fedorova; E Braga; I Ernberg; C Wahlestedt; G Klein; E R Zabarovsky
Journal:  Chromosome Res       Date:  2000       Impact factor: 5.239

4.  PCR candidate region mismatch scanning: adaptation to quantitative, high-throughput genotyping.

Authors:  M Beaulieu; G P Larson; L Geller; S D Flanagan; T G Krontiris
Journal:  Nucleic Acids Res       Date:  2001-03-01       Impact factor: 16.971

5.  Distribution of genome shared identical by descent by two individuals in grandparent-type relationship.

Authors:  V T Stefanov
Journal:  Genetics       Date:  2000-11       Impact factor: 4.562

6.  An approach for global scanning of single nucleotide variations.

Authors:  Xinghua Pan; Sherman M Weissman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-01       Impact factor: 11.205

7.  Two-dimensional conformation-dependent electrophoresis (2D-CDE) to separate DNA fragments containing unmatched bulge from complex DNA samples.

Authors:  Gudmundur H Gunnarsson; Hans G Thormar; Bjarki Gudmundsson; Lina Akesson; Jon J Jonsson
Journal:  Nucleic Acids Res       Date:  2004-02-03       Impact factor: 16.971

8.  2005 Curt Stern Award address. Exploring along a crooked path.

Authors:  Patrick O Brown
Journal:  Am J Hum Genet       Date:  2006-09       Impact factor: 11.025

9.  Shared genomic segment analysis. Mapping disease predisposition genes in extended pedigrees using SNP genotype assays.

Authors:  A Thomas; N J Camp; J M Farnham; K Allen-Brady; L A Cannon-Albright
Journal:  Ann Hum Genet       Date:  2007-12-18       Impact factor: 1.670

10.  Mutation detection by mismatch binding protein, MutS, in amplified DNA: application to the cystic fibrosis gene.

Authors:  A Lishanski; E A Ostrander; J Rine
Journal:  Proc Natl Acad Sci U S A       Date:  1994-03-29       Impact factor: 11.205

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