Literature DB >> 8503847

Production, purification and characterization of the catalytic domain of glucoamylase from Aspergillus niger.

B Stoffer1, T P Frandsen, P K Busk, P Schneider, I Svendsen, B Svensson.   

Abstract

The catalytic domain of glucoamylases G1 and G2 from Aspergillus niger is produced in vitro in high yield by limited proteolysis using either subtilisin Novo or subtilisin Carlsberg. Purification by affinity chromatography on an acarbose-Sepharose column followed by ion-exchange chromatography on HiLoad Q-Sepharose leads to separation of a number of structurally closely related forms of domain. The cleavage occurs primarily between Val-470 and Ala-471 as indicated by C-terminal sequencing, whereas the N-terminus is intact. Subtilisin Carlsberg, in addition, produces a type of domain which is hydrolysed before Ser-444, an O-glycosylated residue. This leaves the fragment Ser-444-Val-470 disulphide-bonded to the large N-terminal part of the catalytic domain. Subtilisin Novo, in contrast, tends to yield a minor fraction of forms extending approx. 30-40 amino-acid residues beyond Val-470. The thermostability is essentially the same for the single-chain catalytic domain and the original glucoamylases G1 and G2, whereas the catalytic domain cut between Ser-443 and Ser-444 is less thermostable. For both types of domain the kinetic parameters, Km and kcat., for hydrolysis of maltose are very close to the values found for glucoamylases G1 and G2.

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Year:  1993        PMID: 8503847      PMCID: PMC1134288          DOI: 10.1042/bj2920197

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  18 in total

1.  Crystal structure of glucoamylase from Aspergillus awamori var. X100 to 2.2-A resolution.

Authors:  A Aleshin; A Golubev; L M Firsov; R B Honzatko
Journal:  J Biol Chem       Date:  1992-09-25       Impact factor: 5.157

2.  Determination of amino acid compositions and NH2-terminal sequences of peptides electroblotted onto PVDF membranes from tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis: application to peptide mapping of human complement component C3.

Authors:  M Ploug; A L Jensen; V Barkholt
Journal:  Anal Biochem       Date:  1989-08-15       Impact factor: 3.365

3.  Identification of carboxylic acid residues in glucoamylase G2 from Aspergillus niger that participate in catalysis and substrate binding.

Authors:  B Svensson; A J Clarke; I Svendsen; H Møller
Journal:  Eur J Biochem       Date:  1990-02-22

4.  Tricine-sodium dodecyl sulfate-polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa.

Authors:  H Schägger; G von Jagow
Journal:  Anal Biochem       Date:  1987-11-01       Impact factor: 3.365

5.  Sequence homology between putative raw-starch binding domains from different starch-degrading enzymes.

Authors:  B Svensson; H Jespersen; M R Sierks; E A MacGregor
Journal:  Biochem J       Date:  1989-11-15       Impact factor: 3.857

6.  Characterization of a glucoamylase G2 from Aspergillus niger.

Authors:  B Svensson; K Larsen; A Gunnarsson
Journal:  Eur J Biochem       Date:  1986-02-03

7.  Different behavior towards raw starch of three forms of glucoamylase from a Rhizopus sp.

Authors:  T Takahashi; K Kato; Y Ikegami; M Irie
Journal:  J Biochem       Date:  1985-09       Impact factor: 3.387

8.  Nucleotide sequence of the glucoamylase gene GLU1 in the yeast Saccharomycopsis fibuligera.

Authors:  T Itoh; I Ohtsuki; I Yamashita; S Fukui
Journal:  J Bacteriol       Date:  1987-09       Impact factor: 3.490

9.  Enzymatic studies on a cellulase system of Trichoderma viride. IV. Purification and properties of a less-random type cellulase.

Authors:  G Okada
Journal:  J Biochem       Date:  1976-11       Impact factor: 3.387

10.  Site-directed mutagenesis at the active site Trp120 of Aspergillus awamori glucoamylase.

Authors:  M R Sierks; C Ford; P J Reilly; B Svensson
Journal:  Protein Eng       Date:  1989-08
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  13 in total

1.  pH-dependence of the fast step of maltose hydrolysis catalysed by glucoamylase G1 from Aspergillus niger.

Authors:  U Christensen
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

2.  LC-mass spectrometry analysis of N- and C-terminal boundary sequences of polypeptide fragments by limited proteolysis.

Authors:  Justin G Stroh; Pat Loulakis; Anthony J Lanzetti; Julie Xie
Journal:  J Am Soc Mass Spectrom       Date:  2005-01       Impact factor: 3.109

3.  Gradient chromatofocusing-mass spectrometry: a new technique in protein analysis.

Authors:  Lian Shan; James A Hribar; Xiang Zhou; David J Anderson
Journal:  J Am Soc Mass Spectrom       Date:  2008-05-15       Impact factor: 3.109

4.  Hydrophobin fusions for high-level transient protein expression and purification in Nicotiana benthamiana.

Authors:  Jussi J Joensuu; Andrew J Conley; Michael Lienemann; Jim E Brandle; Markus B Linder; Rima Menassa
Journal:  Plant Physiol       Date:  2009-12-11       Impact factor: 8.340

5.  Raw-starch-digesting and thermostable alpha-amylase from the yeast Cryptococcus sp. S-2: purification, characterization, cloning and sequencing.

Authors:  H Iefuji; M Chino; M Kato; Y Iimura
Journal:  Biochem J       Date:  1996-09-15       Impact factor: 3.857

6.  Structure of the catalytic domain of glucoamylase from Aspergillus niger.

Authors:  Jaeyong Lee; Mark Paetzel
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2011-01-21

Review 7.  High performance affinity chromatography and related separation methods for the analysis of biological and pharmaceutical agents.

Authors:  Chenhua Zhang; Elliott Rodriguez; Cong Bi; Xiwei Zheng; Doddavenkatana Suresh; Kyungah Suh; Zhao Li; Fawzi Elsebaei; David S Hage
Journal:  Analyst       Date:  2018-01-15       Impact factor: 4.616

Review 8.  Affinity chromatography: A review of trends and developments over the past 50 years.

Authors:  Elliott L Rodriguez; Saumen Poddar; Sazia Iftekhar; Kyungah Suh; Ashley G Woolfork; Susan Ovbude; Allegra Pekarek; Morgan Walters; Shae Lott; David S Hage
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2020-08-14       Impact factor: 3.205

9.  Substitution of asparagine residues in Aspergillus awamori glucoamylase by site-directed mutagenesis to eliminate N-glycosylation and inactivation by deamidation.

Authors:  H M Chen; C Ford; P J Reilly
Journal:  Biochem J       Date:  1994-07-01       Impact factor: 3.857

10.  Physiochemical properties and kinetics of glucoamylase produced from deoxy-d-glucose resistant mutant of Aspergillus niger for soluble starch hydrolysis.

Authors:  Muhammad Riaz; Muhammad Hamid Rashid; Lindsay Sawyer; Saeed Akhtar; Muhammad Rizwan Javed; Habibullah Nadeem; Martin Wear
Journal:  Food Chem       Date:  2012-01-01       Impact factor: 7.514

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