Literature DB >> 8464065

1.8 A refined structure of the lipase from Geotrichum candidum.

J D Schrag1, M Cygler.   

Abstract

A lipase from the fungus Geotrichum candidum is one of only three interfacially activated lipases whose structures have been reported to date. We have previously reported the partially refined 2.2 A structure of this enzyme. We have subsequently extended the resolution and here report the fully refined 1.8 A structure of this lipase. The structure observed in the crystal is apparently not the lipolytic conformation, as the active site is not accessible from the surface of the molecule. A single large cavity is found in the interior of the molecule and extends from the catalytic Ser to two surface helices, suggesting that this face may be the region that interacts with the lipid interface. The mobility of local segments on this face is indicated by temperature factors larger than elsewhere in the molecule and by the observation of several residues whose side-chains are discretely disordered. These observations strongly suggest that this portion of the molecule is involved in interfacial and substrate binding, but the exact nature of the conformational changes induced by binding to the lipid interface can not be determined.

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Year:  1993        PMID: 8464065     DOI: 10.1006/jmbi.1993.1171

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  22 in total

1.  Crystal structure of cutinase covalently inhibited by a triglyceride analogue.

Authors:  S Longhi; M Mannesse; H M Verheij; G H De Haas; M Egmond; E Knoops-Mouthuy; C Cambillau
Journal:  Protein Sci       Date:  1997-02       Impact factor: 6.725

2.  Molecular modeling of the enantioselectivity in lipase-catalyzed transesterification reactions.

Authors:  F Haeffner; T Norin; K Hult
Journal:  Biophys J       Date:  1998-03       Impact factor: 4.033

3.  Molecular modeling of the structures of human and rat pancreatic cholesterol esterases.

Authors:  S R Feaster; D M Quinn; B L Barnett
Journal:  Protein Sci       Date:  1997-01       Impact factor: 6.725

4.  Biochemical and structural characterization of triacylglycerol lipase from Penicillium cyclopium.

Authors:  A Ibrik; H Chahinian; N Rugani; L Sarda; L C Comeau
Journal:  Lipids       Date:  1998-04       Impact factor: 1.880

5.  Three-dimensional structures of enzyme-substrate complexes of the hydroxynitrile lyase from Hevea brasiliensis.

Authors:  J Zuegg; K Gruber; M Gugganig; U G Wagner; C Kratky
Journal:  Protein Sci       Date:  1999-10       Impact factor: 6.725

6.  Interfacial activation-based molecular bioimprinting of lipolytic enzymes.

Authors:  I Mingarro; C Abad; L Braco
Journal:  Proc Natl Acad Sci U S A       Date:  1995-04-11       Impact factor: 11.205

7.  Two conformational states of Candida rugosa lipase.

Authors:  P Grochulski; Y Li; J D Schrag; M Cygler
Journal:  Protein Sci       Date:  1994-01       Impact factor: 6.725

8.  Purification and characterization of a Penicillium sp. lipase which discriminates against diglycerides.

Authors:  K Gulomova; E Ziomek; J D Schrag; K Davranov; M Cygler
Journal:  Lipids       Date:  1996-04       Impact factor: 1.880

9.  Trp89 in the lid of Humicola lanuginosa lipase is important for efficient hydrolysis of tributyrin.

Authors:  M Holmquist; M Martinelle; I G Clausen; S Patkar; A Svendsen; K Hult
Journal:  Lipids       Date:  1994-09       Impact factor: 1.880

10.  Computer modeling of substrate binding to lipases from Rhizomucor miehei, Humicola lanuginosa, and Candida rugosa.

Authors:  M Norin; F Haeffner; A Achour; T Norin; K Hult
Journal:  Protein Sci       Date:  1994-09       Impact factor: 6.725

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