Literature DB >> 8446897

Crystal structure of a synthetic triple-stranded alpha-helical bundle.

B Lovejoy1, S Choe, D Cascio, D K McRorie, W F DeGrado, D Eisenberg.   

Abstract

The x-ray crystal structure of a peptide designed to form a double-stranded parallel coiled coil shows that it is actually a triple-stranded coiled coil formed by three alpha-helices. Unlike the designed parallel coiled coil, the helices run up-up-down. The structure is stabilized by a distinctive hydrophobic interface consisting of eight layers. As in the design, each alpha-helix in the coiled coil contributes one leucine side chain to each layer. The structure suggests that hydrophobic interactions are a dominant factor in the stabilization of coiled coils. The stoichiometry and geometry of coiled coils are primarily determined by side chain packing in the solvent-inaccessible interior, but electrostatic interactions also contribute.

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Year:  1993        PMID: 8446897     DOI: 10.1126/science.8446897

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  67 in total

1.  The role of position a in determining the stability and oligomerization state of alpha-helical coiled coils: 20 amino acid stability coefficients in the hydrophobic core of proteins.

Authors:  K Wagschal; B Tripet; P Lavigne; C Mant; R S Hodges
Journal:  Protein Sci       Date:  1999-11       Impact factor: 6.725

2.  De novo simulations of the folding thermodynamics of the GCN4 leucine zipper.

Authors:  D Mohanty; A Kolinski; J Skolnick
Journal:  Biophys J       Date:  1999-07       Impact factor: 4.033

3.  Nonpolar contributions to conformational specificity in assemblies of designed short helical peptides.

Authors:  C L Boon; A Chakrabartty
Journal:  Protein Sci       Date:  2000-05       Impact factor: 6.725

4.  An active role for a structured B-linker in effector control of the sigma54-dependent regulator DmpR.

Authors:  E O'Neill; P Wikström; V Shingler
Journal:  EMBO J       Date:  2001-02-15       Impact factor: 11.598

5.  Design of three-dimensional domain-swapped dimers and fibrous oligomers.

Authors:  N L Ogihara; G Ghirlanda; J W Bryson; M Gingery; W F DeGrado; D Eisenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-13       Impact factor: 11.205

6.  Folding of a three-stranded coiled coil.

Authors:  E Dürr; H R Bosshard
Journal:  Protein Sci       Date:  2000-07       Impact factor: 6.725

7.  Automated protein crystal structure determination using ELVES.

Authors:  James Holton; Tom Alber
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-29       Impact factor: 11.205

8.  Reversible and fast association equilibria of a molecular chaperone, gp57A, of bacteriophage T4.

Authors:  Said A Ali; Noriyuki Iwabuchi; Takuro Matsui; Ken Hirota; Shun-Ichi Kidokoro; Munehito Arai; Kunihiro Kuwajima; Peter Schuck; Fumio Arisaka
Journal:  Biophys J       Date:  2003-10       Impact factor: 4.033

9.  Solution structure and dynamics of a de novo designed three-helix bundle protein.

Authors:  S T Walsh; H Cheng; J W Bryson; H Roder; W F DeGrado
Journal:  Proc Natl Acad Sci U S A       Date:  1999-05-11       Impact factor: 11.205

10.  A protein engineered to bind uranyl selectively and with femtomolar affinity.

Authors:  Lu Zhou; Mike Bosscher; Changsheng Zhang; Salih Ozçubukçu; Liang Zhang; Wen Zhang; Charles J Li; Jianzhao Liu; Mark P Jensen; Luhua Lai; Chuan He
Journal:  Nat Chem       Date:  2014-01-26       Impact factor: 24.427

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