Literature DB >> 14507723

Reversible and fast association equilibria of a molecular chaperone, gp57A, of bacteriophage T4.

Said A Ali1, Noriyuki Iwabuchi, Takuro Matsui, Ken Hirota, Shun-Ichi Kidokoro, Munehito Arai, Kunihiro Kuwajima, Peter Schuck, Fumio Arisaka.   

Abstract

The association of a molecular chaperone, gp57A, of bacteriophage T4, which facilitates formation of the long and short tail fibers, was investigated by analytical ultracentrifugation, differential scanning microcalorimetry, and stopped-flow circular dichroism (CD) to establish the association scheme of the protein. Gp57A is an oligomeric alpha-helix protein with 79 amino acids. Analysis of the sedimentation velocity data by direct boundary modeling with Lamm equation solutions together with a more detailed boundary analysis incorporating association schemes led us to conclude that at least three oligomeric species of gp57A are in reversible and fast association equilibria and that a 3(mer)-6(mer)-12(mer) model described the data best. On the other hand, differential scanning microcalorimetry revealed a highly reversible two-step transition of dissociation/denaturation, both of which accompanied decrease in CD at 222 nm. The melting curve analysis revealed that it is consistent with a 6(mer)-3(mer)-1(mer) model. The refolding/association kinetics of gp57A measured by stopped-flow CD was consistent with the interpretation that the bimolecular reaction from trimer to hexamer was preceded by a fast alpha-helix formation in the dead-time. Trimer or hexamer is likely the functional oligomeric state of gp57A.

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Year:  2003        PMID: 14507723      PMCID: PMC1303484          DOI: 10.1016/s0006-3495(03)74683-9

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  38 in total

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Journal:  J Mol Biol       Date:  1974-03-15       Impact factor: 5.469

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Journal:  J Mol Biol       Date:  1973-10-05       Impact factor: 5.469

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Journal:  Biochemistry       Date:  1981-01-06       Impact factor: 3.162

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Journal:  J Bacteriol       Date:  1978-11       Impact factor: 3.490

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Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

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  9 in total

1.  Sedimentation patterns of rapidly reversible protein interactions.

Authors:  Peter Schuck
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Crystallization of the carboxy-terminal region of the bacteriophage T4 proximal long tail fibre protein gp34.

Authors:  Meritxell Granell; Mikiyoshi Namura; Sara Alvira; Carmela Garcia-Doval; Abhimanyu K Singh; Irina Gutsche; Mark J van Raaij; Shuji Kanamaru
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-06-19       Impact factor: 1.056

3.  Foreword to 'Multiscale structural biology: biophysical principles and mechanisms underlying the action of bio-nanomachines', a special issue in Honour of Fumio Arisaka's 70th birthday.

Authors:  Damien Hall; Junichi Takagi; Haruki Nakamura
Journal:  Biophys Rev       Date:  2018-03-02

4.  Congratulations to Dr. Fumio Arisaka on his 70th birthday.

Authors:  Peter Schuck
Journal:  Biophys Rev       Date:  2018-02-06

5.  The analysis of macromolecular interactions by sedimentation equilibrium.

Authors:  Rodolfo Ghirlando
Journal:  Methods       Date:  2010-12-16       Impact factor: 3.608

Review 6.  Morphogenesis of the T4 tail and tail fibers.

Authors:  Petr G Leiman; Fumio Arisaka; Mark J van Raaij; Victor A Kostyuchenko; Anastasia A Aksyuk; Shuji Kanamaru; Michael G Rossmann
Journal:  Virol J       Date:  2010-12-03       Impact factor: 4.099

7.  Crystal Structure of the Carboxy-Terminal Region of the Bacteriophage T4 Proximal Long Tail Fiber Protein Gp34.

Authors:  Meritxell Granell; Mikiyoshi Namura; Sara Alvira; Shuji Kanamaru; Mark J van Raaij
Journal:  Viruses       Date:  2017-06-30       Impact factor: 5.048

Review 8.  Unified understanding of folding and binding mechanisms of globular and intrinsically disordered proteins.

Authors:  Munehito Arai
Journal:  Biophys Rev       Date:  2018-01-06

9.  The N-terminal octapeptide acts as a dimerization inhibitor of SARS coronavirus 3C-like proteinase.

Authors:  Ping Wei; Keqiang Fan; Hao Chen; Liang Ma; Changkang Huang; Lei Tan; Dong Xi; Chunmei Li; Ying Liu; Aoneng Cao; Luhua Lai
Journal:  Biochem Biophys Res Commun       Date:  2005-11-28       Impact factor: 3.575

  9 in total

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