Literature DB >> 8437580

The consensus sequence of Kluyveromyces lactis centromeres shows homology to functional centromeric DNA from Saccharomyces cerevisiae.

J J Heus1, B J Zonneveld, H Y de Steensma, J A van den Berg.   

Abstract

The nucleotide sequences of five of the six centromeres of the yeast Kluyveromyces lactis were determined. Mutual comparison of these sequences led to the following consensus: a short highly conserved box (5'-ATCACGTGA-3') flanked by an AT-rich (+/- 90%) stretch of +/- 160 bp followed by another conserved box (5'-TNNTTTATGTTTCCGAAAATTAATAT-3'). These three elements were named KlCDEI, KlCDEII, and KlCDEIII respectively, by analogy with the situation in Saccharomyces cerevisiae. In addition, a second 100 bp AT-rich (+/- 90%) element, named KlCDE0, was found +/- 150 bp upstream of KlCDEI. The sequences of both KlCDEI and KlCDEIII are highly conserved between K. lactis and S. cerevisiae; however, centromeres of K. lactis do not function in S. cerevisiae and vice versa. The most obvious differences between the centromeres of the two yeast species are the length of the AT-rich CDEII, which is 161-164 bp in K. lactis versus 78-86 bp in S. cerevisiae and the presence in K. lactis of KlCDE0, which is not found in S. cerevisiae.

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Year:  1993        PMID: 8437580     DOI: 10.1007/bf00277133

Source DB:  PubMed          Journal:  Mol Gen Genet        ISSN: 0026-8925


  31 in total

1.  In vivo characterization of the Saccharomyces cerevisiae centromere DNA element I, a binding site for the helix-loop-helix protein CPF1.

Authors:  R Niedenthal; R Stoll; J H Hegemann
Journal:  Mol Cell Biol       Date:  1991-07       Impact factor: 4.272

2.  Centromeric DNA of Kluyveromyces lactis.

Authors:  J J Heus; B J Zonneveld; H Y Steensma; J A Van den Berg
Journal:  Curr Genet       Date:  1990-12       Impact factor: 3.886

3.  The centromere region of Arabidopsis thaliana chromosome 1 contains telomere-similar sequences.

Authors:  E J Richards; H M Goodman; F M Ausubel
Journal:  Nucleic Acids Res       Date:  1991-06-25       Impact factor: 16.971

4.  Composite motifs and repeat symmetry in S. pombe centromeres: direct analysis by integration of NotI restriction sites.

Authors:  Y Chikashige; N Kinoshita; Y Nakaseko; T Matsumoto; S Murakami; O Niwa; M Yanagida
Journal:  Cell       Date:  1989-06-02       Impact factor: 41.582

Review 5.  Centromeres of budding and fission yeasts.

Authors:  L Clarke
Journal:  Trends Genet       Date:  1990-05       Impact factor: 11.639

6.  Analysis of gene control signals by DNA fusion and cloning in Escherichia coli.

Authors:  M J Casadaban; S N Cohen
Journal:  J Mol Biol       Date:  1980-04       Impact factor: 5.469

7.  Mutational analysis of centromere DNA from chromosome VI of Saccharomyces cerevisiae.

Authors:  J H Hegemann; J H Shero; G Cottarel; P Philippsen; P Hieter
Journal:  Mol Cell Biol       Date:  1988-06       Impact factor: 4.272

8.  Isolation of a Saccharomyces cerevisiae centromere DNA-binding protein, its human homolog, and its possible role as a transcription factor.

Authors:  R J Bram; R D Kornberg
Journal:  Mol Cell Biol       Date:  1987-01       Impact factor: 4.272

9.  Isolation of a yeast centromere and construction of functional small circular chromosomes.

Authors:  L Clarke; J Carbon
Journal:  Nature       Date:  1980-10-09       Impact factor: 49.962

10.  A system of shuttle vectors and yeast host strains designed for efficient manipulation of DNA in Saccharomyces cerevisiae.

Authors:  R S Sikorski; P Hieter
Journal:  Genetics       Date:  1989-05       Impact factor: 4.562

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  19 in total

1.  Structure of the Centromere Binding Factor 3 Complex from Kluyveromyces lactis.

Authors:  Phong D Lee; Hui Wei; Dongyan Tan; Stephen C Harrison
Journal:  J Mol Biol       Date:  2019-08-17       Impact factor: 5.469

Review 2.  Centromere Structure and Function.

Authors:  Kerry Bloom; Vincenzo Costanzo
Journal:  Prog Mol Subcell Biol       Date:  2017

3.  Phylogenetic analysis of fungal centromere H3 proteins.

Authors:  Richard E Baker; Kelly Rogers
Journal:  Genetics       Date:  2006-10-08       Impact factor: 4.562

4.  The nucleosome repeat length of Kluyveromyces lactis is 16 bp longer than that of Saccharomyces cerevisiae.

Authors:  J J Heus; B J Zonneveld; K S Bloom; H Y de Steensma; J A van den Berg
Journal:  Nucleic Acids Res       Date:  1993-05-11       Impact factor: 16.971

5.  Sos7, an essential component of the conserved Schizosaccharomyces pombe Ndc80-MIND-Spc7 complex, identifies a new family of fungal kinetochore proteins.

Authors:  Visnja Jakopec; Boris Topolski; Ursula Fleig
Journal:  Mol Cell Biol       Date:  2012-06-18       Impact factor: 4.272

Review 6.  Diversity in requirement of genetic and epigenetic factors for centromere function in fungi.

Authors:  Babhrubahan Roy; Kaustuv Sanyal
Journal:  Eukaryot Cell       Date:  2011-09-09

7.  Chromatin structures of Kluyveromyces lactis centromeres in K. lactis and Saccharomyces cerevisiae.

Authors:  J J Heus; K S Bloom; B J Zonneveld; H Y Steensma; J A Van den Berg
Journal:  Chromosoma       Date:  1993-11       Impact factor: 4.316

8.  Mutational analysis of centromeric DNA elements of Kluyveromyces lactis and their role in determining the species specificity of the highly homologous centromeres from K. lactis and Saccharomyces cerevisiae.

Authors:  J J Heus; B J Zonneveld; H Y Steensma; J A Van den Berg
Journal:  Mol Gen Genet       Date:  1994-05-10

9.  Centromere promoter factors (CPF1) of the yeasts Saccharomyces cerevisiae and Kluyveromyces lactis are functionally exchangeable, despite low overall homology.

Authors:  W Mulder; A A Winkler; I H Scholten; B J Zonneveld; J H de Winde; H Yde Steensma; L A Grivell
Journal:  Curr Genet       Date:  1994-09       Impact factor: 3.886

10.  Identification of a centromeric activity in the autonomously replicating TRA region allows improvement of the host-vector system for Candida maltosa.

Authors:  M Ohkuma; K Kobayashi; S Kawai; C W Hwang; A Ohta; M Takagi
Journal:  Mol Gen Genet       Date:  1995-12-10
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