Literature DB >> 8422410

Misuse of graphical analysis in nonlinear sugar transport kinetics by Eadie-Hofstee plots.

G F Fuhrmann1, B Völker.   

Abstract

It has become common practice to analyse the sugar transport kinetics from initial uptake rates in Saccharomyces cerevisiae cells with Eadie-Hofstee plots. These plots often demonstrate a nonlinear behaviour. They have been resolved incorrectly into two quasilinear components indicating the presence of (at least) two uptake systems or components, with Km values differing by a factor of about 10. This graphical analysis neglects the obvious additivity of the two hypothetical systems and is therefore in error. A more efficient way to determine kinetic parameters from initial uptake experiments is to use computer-assisted nonlinear regression analysis.

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Year:  1993        PMID: 8422410     DOI: 10.1016/0005-2736(93)90396-h

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  18 in total

1.  Integrating terminal truncation and oligopeptide fusion for a novel protein engineering strategy to improve specific activity and catalytic efficiency: alkaline α-amylase as a case study.

Authors:  Haiquan Yang; Long Liu; Hyun-dong Shin; Rachel R Chen; Jianghua Li; Guocheng Du; Jian Chen
Journal:  Appl Environ Microbiol       Date:  2013-08-16       Impact factor: 4.792

2.  In silico rational design and systems engineering of disulfide bridges in the catalytic domain of an alkaline α-amylase from Alkalimonas amylolytica to improve thermostability.

Authors:  Long Liu; Zhuangmei Deng; Haiquan Yang; Jianghua Li; Hyun-dong Shin; Rachel R Chen; Guocheng Du; Jian Chen
Journal:  Appl Environ Microbiol       Date:  2013-11-08       Impact factor: 4.792

3.  Model of specific, apparently non-saturable solute uptake kinetics based on a carrier mechanism.

Authors:  J Lenz; M Höfer; K Sigler
Journal:  Folia Microbiol (Praha)       Date:  1997       Impact factor: 2.099

4.  Molecular analysis of maltotriose transport and utilization by Saccharomyces cerevisiae.

Authors:  Rachel E Day; Peter J Rogers; Ian W Dawes; Vincent J Higgins
Journal:  Appl Environ Microbiol       Date:  2002-11       Impact factor: 4.792

5.  Computer-assisted nonlinear regression analysis of the multicomponent glucose uptake kinetics of Saccharomyces cerevisiae.

Authors:  D M Coons; R B Boulton; L F Bisson
Journal:  J Bacteriol       Date:  1995-06       Impact factor: 3.490

6.  Aspects of glucose uptake in Saccharomyces cerevisiae.

Authors:  T Gonçalves; M C Loureiro-Dias
Journal:  J Bacteriol       Date:  1994-03       Impact factor: 3.490

7.  Characteristics of Fps1-dependent and -independent glycerol transport in Saccharomyces cerevisiae.

Authors:  F C Sutherland; F Lages; C Lucas; K Luyten; J Albertyn; S Hohmann; B A Prior; S G Kilian
Journal:  J Bacteriol       Date:  1997-12       Impact factor: 3.490

8.  Fusion of an oligopeptide to the N terminus of an alkaline α-amylase from Alkalimonas amylolytica simultaneously improves the enzyme's catalytic efficiency, thermal stability, and resistance to oxidation.

Authors:  Haiquan Yang; Xinyao Lu; Long Liu; Jianghua Li; Hyun-dong Shin; Rachel R Chen; Guocheng Du; Jian Chen
Journal:  Appl Environ Microbiol       Date:  2013-03-01       Impact factor: 4.792

9.  Overexpression of Mal61p in Saccharomyces cerevisiae and characterization of maltose transport in artificial membranes.

Authors:  M E van der Rest; Y de Vries; B Poolman; W N Konings
Journal:  J Bacteriol       Date:  1995-10       Impact factor: 3.490

Review 10.  Chemostat cultivation as a tool for studies on sugar transport in yeasts.

Authors:  R A Weusthuis; J T Pronk; P J van den Broek; J P van Dijken
Journal:  Microbiol Rev       Date:  1994-12
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