Literature DB >> 8422385

Inhibition of tryptophan synthase by (1-fluorovinyl)glycine.

Y Xu1, R H Abeles.   

Abstract

Tryptophan synthase (alpha 2 beta 2 complex) from Salmonella typhimurium catalyzes the formation of tryptophan from serine and indole. The enzyme is inactivated by (1-fluorovinyl)glycine. Concomitant with enzyme inactivation, the absorbance at 485 nm increases, indicating covalent modification of pyridoxal 5'-phosphate. It is proposed that inactivation involves elimination of HF to form an allene, which reacts with a nucleophile at the active site. The inactivation reaction involves an alpha,beta-elimination, as does the formation of tryptophan from indole and serine. The inactivation occurs with k(in) > 1.3 s-1, which is very close to k(cat) (6.4 s-1) for the formation of tryptophan from indole and serine. The inactive enzyme (alpha 2 beta 2) regains activity with k(off) = 0.005 min-1. Aminoacetone is formed during reaction, and pyridoxal 5'-phosphate is regenerated. Tryptophan synthase also catalyzes the dehydration of serine, or 3-fluoroalanine, to pyruvate in the absence of indole. This reaction involves an alpha,beta-elimination and the intermediate formation of an aminoacrylate adduct with pyridoxal 5'-phosphate, as does the formation of tryptophan. Pyruvate formation proceeds at less than 5% the rate of tryptophan formation. With [2-2H]serine an isotope effect (DVmax = 1.5) is observed. We propose that pyruvate formation is limited by the rate of hydration of the aminoacrylate intermediate and the rate of the abstraction of the serine alpha-hydrogen.

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Year:  1993        PMID: 8422385     DOI: 10.1021/bi00054a010

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  9 in total

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2.  Synthesis of Higher α-Chlorovinyl and α-Bromovinyl Amino Acids: The Amino Protecting Group Determines the Reaction Course.

Authors:  David B Berkowitz; Michelle L Pedersen; Wan-Jin Jahng
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3.  Mechanism of Inactivation of Ornithine Aminotransferase by (1S,3S)-3-Amino-4-(hexafluoropropan-2-ylidenyl)cyclopentane-1-carboxylic Acid.

Authors:  Matthew J Moschitto; Peter F Doubleday; Daniel S Catlin; Neil L Kelleher; Dali Liu; Richard B Silverman
Journal:  J Am Chem Soc       Date:  2019-06-28       Impact factor: 15.419

4.  Cometabolism of a nongrowth substrate: L-serine utilization by Corynebacterium glutamicum.

Authors:  Roman Netzer; Petra Peters-Wendisch; Lothar Eggeling; Hermann Sahm
Journal:  Appl Environ Microbiol       Date:  2004-12       Impact factor: 4.792

5.  Synthesis and Deployment of an Elusive Fluorovinyl Cation Equivalent: Access to Quaternary α-(1'-Fluoro)vinyl Amino Acids as Potential PLP Enzyme Inactivators.

Authors:  Christopher D McCune; Matthew L Beio; Jill M Sturdivant; Roberto de la Salud-Bea; Brendan M Darnell; David B Berkowitz
Journal:  J Am Chem Soc       Date:  2017-09-28       Impact factor: 15.419

6.  Visualizing the tunnel in tryptophan synthase with crystallography: Insights into a selective filter for accommodating indole and rejecting water.

Authors:  Eduardo Hilario; Bethany G Caulkins; Yu-Ming M Huang; Wanli You; Chia-En A Chang; Leonard J Mueller; Michael F Dunn; Li Fan
Journal:  Biochim Biophys Acta       Date:  2015-12-17

7.  Use of Fluorinated Functionality in Enzyme Inhibitor Development: Mechanistic and Analytical Advantages.

Authors:  David B Berkowitz; Kannan R Karukurichi; Roberto de la Salud-Bea; David L Nelson; Christopher D McCune
Journal:  J Fluor Chem       Date:  2008-09       Impact factor: 2.050

8.  Protocol: analytical methods for visualizing the indolic precursor network leading to auxin biosynthesis.

Authors:  Molly Tillmann; Qian Tang; Jerry D Cohen
Journal:  Plant Methods       Date:  2021-06-22       Impact factor: 4.993

9.  Resistance of Mycobacterium tuberculosis to indole 4-carboxamides occurs through alterations in drug metabolism and tryptophan biosynthesis.

Authors:  M Daben J Libardo; Caroline J Duncombe; Simon R Green; Paul G Wyatt; Stephen Thompson; Peter C Ray; Thomas R Ioerger; Sangmi Oh; Michael B Goodwin; Helena I M Boshoff; Clifton E Barry
Journal:  Cell Chem Biol       Date:  2021-03-24       Impact factor: 8.116

  9 in total

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