Literature DB >> 8403507

Population study of T cell receptor V beta gene usage in peripheral blood lymphocytes: differences in ethnic groups.

A Geursen1, M A Skinner, L A Townsend, L K Perko, S J Farmiloe, J S Peake, I J Simpson, J D Fraser, P L Tan.   

Abstract

The T cell receptor (TCR) V beta repertoire in peripheral blood lymphocytes (PBL) of a large number of healthy individuals was analysed by quantifying V beta-specific mRNA using the method of anchored multiprimer DNA amplification and a reverse dot blot assay. Among 16 V beta gene families examined, particular V beta genes were noted to be unequally expressed in the PBL of 70 healthy donors. The frequently used genes belong to the V beta 4, 5, 6, 8 and 13 (12) families, while V beta 1, 9 and 15 were the least frequently used gene families. This bias in gene usage was observed in all individuals. Marked deviation from the mean percentage usage was noted for some V beta genes in individuals when their PBL were examined serially, but the common pattern of biased usage was not grossly distorted. When the TCR repertoire of different ethnic groups was examined, a lower mean frequency of V beta 3.2 was seen in the repertoire of 19 Caucasians compared with 25 age-matched Samoans (P < 0.003). Conversely, the expression of V beta 5.1 and V beta 5.3 was higher in Caucasians than in 51 age-matched Polynesians (Maoris and Samoans, P < 0.003). Considering the 20% co-efficient of variation in the estimate of V beta gene usage, our data from 70 unrelated individuals suggest that in PBL, individual variations in the TCR repertoire were superimposed upon a common biased usage of V beta genes in the general population.

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Year:  1993        PMID: 8403507      PMCID: PMC1534351          DOI: 10.1111/j.1365-2249.1993.tb06001.x

Source DB:  PubMed          Journal:  Clin Exp Immunol        ISSN: 0009-9104            Impact factor:   4.330


  30 in total

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Review 2.  The human T cell receptor in health and disease.

Authors:  P A Moss; W M Rosenberg; J I Bell
Journal:  Annu Rev Immunol       Date:  1992       Impact factor: 28.527

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4.  Nearly identical T-cell receptor V-gene usage at birth in two cohorts of distinctly different ethnic origin: influence of environment in the final maturation in the adult.

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Journal:  Scand J Immunol       Date:  1992-07       Impact factor: 3.487

5.  Variability in T cell receptor V beta gene usage in human peripheral blood lymphocytes. Studies of identical twins, siblings, and insulin-dependent diabetes mellitus patients.

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Journal:  J Immunol       Date:  1992-09-01       Impact factor: 5.422

6.  Human T cells expressing V beta 8 do not predominantly recognize DR2 alloantigen.

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7.  An experimentally validated panel of subfamily-specific oligonucleotide primers (V alpha 1-w29/V beta 1-w24) for the study of human T cell receptor variable V gene segment usage by polymerase chain reaction.

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Journal:  Eur J Immunol       Date:  1992-05       Impact factor: 5.532

8.  Evidence for the effects of a superantigen in rheumatoid arthritis.

Authors:  X Paliard; S G West; J A Lafferty; J R Clements; J W Kappler; P Marrack; B L Kotzin
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Review 9.  PCR-based analysis of the TCR repertoire in human autoimmune diseases.

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Journal:  Infect Immun       Date:  1996-07       Impact factor: 3.441

2.  A rapid and reliable PCR method for detecting clonal T cell populations.

Authors:  C Lynas; D Howe; J A Copplestone; S A Johnson; M J Phillips
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Authors:  I J Simpson; M A Skinner; A Geursen; J S Peake; W G Abbott; J D Fraser; C M Lockwood; P L Tan
Journal:  Clin Exp Immunol       Date:  1995-08       Impact factor: 4.330

4.  T cell receptor (TCR) Vbeta gene usage in bronchoalveolar lavage and peripheral blood T cells from asthmatic and normal subjects.

Authors:  E Hodges; J Dasmahapatra; J L Smith; C T Quin; S Lanham; M T Krishna; S T Holgate; A J Frew
Journal:  Clin Exp Immunol       Date:  1998-06       Impact factor: 4.330

5.  Highly functional T-cell receptor repertoires are abundant in stem memory T cells and highly shared among individuals.

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  5 in total

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