Literature DB >> 8386547

Comprehensive explanation of the anomalous EPR spectra of wild-type and mutant cytochrome c peroxidase compound ES.

A L Houseman1, P E Doan, D B Goodin, B M Hoffman.   

Abstract

Although the cytochrome c peroxidase/H2O2 reaction product, compound ES, has been a long-standing subject of research, only recently has its broad EPR signal been proven to arise from a radical at Trp-191. Despite this advance, no model has satisfactorily explained the anomalous breadth and shape of this signal, which is conventionally interpreted as having axial symmetry with g parallel approximately 2.04 > g perpendicular approximately 2.01, contrary to expectations for a planar pi radical. Furthermore, these g values exhibit marked temperature and preparation dependencies as well as an unexplained high-field "tail" extending from the g = 2.01 peak. We have reexamined the EPR and ENDOR spectra of compound ES at 35 GHz, as well as those of compound ES in the mutant D235E. This mutation significantly alters the line shape of the Trp-191 free radical. We present a comprehensive model that successfully accounts for the properties of this unusual protein free radical. We show that the EPR spectra of both proteins can be described in terms of a weak exchange interaction between the S = 1 oxyferryl (Fe = O)2+ moiety and a radical on Trp-191; a distribution in protein conformation leads to a distribution in the coupling, which ranges from ferromagnetic to antiferromagnetic. We also derive, for the first time, explicit expressions for frozen-solution and single-crystal spectra of such spin-coupled systems and show that the model accounts for all the data that previously led to apparent anomalies in the interpretation of the frozen-solution and single-crystal [Hori, H., & Yonetani, T. (1985) J. Biol. Chem. 260, 349-355] EPR properties. Finally, we have used the CW EPR and pulsed-EPR saturation-recovery methodology to address reports that the broad signal from the spin-coupled Trp-191 radical is accompanied by a minority (approximately 10%), narrow signal that is associated with a radical site other than Trp-191. We find no evidence for such a species and discuss the earlier reports in light of our model.

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Year:  1993        PMID: 8386547     DOI: 10.1021/bi00067a036

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  24 in total

1.  Trapping of peptide-based surrogates in an artificially created channel of cytochrome c peroxidase.

Authors:  Anna-Maria A Hays; Harry B Gray; David B Goodin
Journal:  Protein Sci       Date:  2003-02       Impact factor: 6.725

2.  Oxoferryl-porphyrin radical catalytic intermediate in cytochrome bd oxidases protects cells from formation of reactive oxygen species.

Authors:  Angela Paulus; Sebastiaan Gijsbertus Hendrik Rossius; Madelon Dijk; Simon de Vries
Journal:  J Biol Chem       Date:  2012-01-27       Impact factor: 5.157

3.  Identification of Surface-Exposed Protein Radicals and A Substrate Oxidation Site in A-Class Dye-Decolorizing Peroxidase from Thermomonospora curvata.

Authors:  Ruben Shrestha; Xuejie Chen; Kasra X Ramyar; Zahra Hayati; Eric A Carlson; Stefan H Bossmann; Likai Song; Brian V Geisbrecht; Ping Li
Journal:  ACS Catal       Date:  2016-10-12       Impact factor: 13.084

4.  Reaction of N-hydroxyguanidine with the ferrous-oxy state of a heme peroxidase cavity mutant: a model for the reactions of nitric oxide synthase.

Authors:  Alycen Pond Nigro; David B Goodin
Journal:  Arch Biochem Biophys       Date:  2010-03-25       Impact factor: 4.013

5.  Crystal structure of Leishmania major peroxidase and characterization of the compound i tryptophan radical.

Authors:  Victoria S Jasion; Julio A Polanco; Yergalem T Meharenna; Huiying Li; Thomas L Poulos
Journal:  J Biol Chem       Date:  2011-05-12       Impact factor: 5.157

Review 6.  Heme enzyme structure and function.

Authors:  Thomas L Poulos
Journal:  Chem Rev       Date:  2014-01-08       Impact factor: 60.622

7.  Geometric and electronic structures of the His-Fe(IV)=O and His-Fe(IV)-Tyr hemes of MauG.

Authors:  Lyndal M R Jensen; Yergalem T Meharenna; Victor L Davidson; Thomas L Poulos; Britt Hedman; Carrie M Wilmot; Ritimukta Sarangi
Journal:  J Biol Inorg Chem       Date:  2012-09-30       Impact factor: 3.358

8.  Replacement of an electron transfer pathway in cytochrome c peroxidase with a surrogate peptide.

Authors:  Anna-Maria A Hays Putnam; Young-Tae Lee; David B Goodin
Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

9.  Construction of a bisaquo heme enzyme and binding by exogenous ligands.

Authors:  D E McRee; G M Jensen; M M Fitzgerald; H A Siegel; D B Goodin
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

Review 10.  Electron transfer between cytochrome c and cytochrome c peroxidase.

Authors:  F Millett; M A Miller; L Geren; B Durham
Journal:  J Bioenerg Biomembr       Date:  1995-06       Impact factor: 2.945

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